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Iguanas rafted more than 8,000 km from North America to Fiji |
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A phylogenomic investigation into the biogeography of the Mexico-eastern U.S. disjunction in Symphyotrichum |
Am J Bot. |
2025 |
40095728
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A comparative genomic analysis at the chromosomal-level reveals evolutionary patterns of aphid chromosomes |
Commun Biol. |
2025 |
40082663
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Chromosome-scale genome assembly of Phyllanthus emblica L. 'Yingyu' |
DNA Res |
2025 |
40070358
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1 Tree
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Resolving phylogenetic conflicts in Pandanales: the dual roles of gene flow and whole-genome duplication |
Front Plant Sci |
2025 |
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Disconnecting trapdoors: Phylogenomic analyses reveal evolutionary contrasts in trapdoor spiders with intercontinental distribution (Idiopidae, Idiopinae) |
Mol Phylogenet Evol |
2025 |
40064408
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The amphipod genome reveals population dynamics and adaptations to hadal environment |
Cell. |
2025 |
40054448
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| Tineo |
Comparative analyses of chloroplast genomes of Theobroma cacao from northern Peru |
PLoS One |
2025 |
40043011
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Miocene climatic fluctuations likely explain the species diversification of Lysionotus (Gesneriaceae) in Pan-Himalaya |
Journal of Systematics and Evolution |
2025 |
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Revisiting Phryma leptostachya L.: phylogenetic relationships and biogeographical patterns from complete plastome |
BMC Plant Biol |
2025 |
40033209
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1 Tree
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Comparative genomics uncovers evolutionary drivers of locust migratory adaptation |
BMC Genomics |
2025 |
40021962
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1 Tree
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| Chen |
Comparative analysis of the mitochondrial genomes of the soft-shelled turtles Palea steindachneri and Pelodiscus axenaria and phylogenetic implications for Trionychia |
Sci Rep |
2025 |
40021811
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A genome-based phylogeny for Mollusca is concordant with fossils and morphology |
Science |
2025 |
40014700
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Deeply Diverged but Morphologically Conserved Lineages in Tornier's Cat Snake (Crotaphopeltis tornieri) of the Eastern Arc Mountains |
Ecol Evol. |
2025 |
40008059
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1 Tree
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Phylogenetic Inferences and Historical Biogeography of Onocleaceae |
Plants |
2025 |
40006769
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Unraveling the Ancient Introgression History of Xanthoceras (Sapindaceae): Insights from Phylogenomic Analysis |
Int. J. Mol. Sci. |
2025 |
40004047
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1 Tree
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| Zhang |
Phylogenetics and Evolutionary Dynamics of Yunnan Acrididae Grasshoppers Inferred from 17 New Mitochondrial Genomes |
Insects |
2025 |
40003781
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Karyotype evolution and speciation in Orthoptera |
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2025 |
39987462
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The gap-free genome assembly and multi-omics analyses illustrate the evolutionary history and the synthesis of medicinal components of Ligustrum lucidum |
Plant J |
2025 |
39985810
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Genome sequencing of three Polyscias species reveals common features in terpene synthase gene family evolution in these species |
Plant Genome |
2025 |
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Structure and evolution of the Forsythieae genome elucidated by chromosome-level genome comparison of Abeliophyllum distichum and Forsythia ovata (Oleaceae) |
Commun Biol |
2025 |
39966682
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Genome of tropical bed bug Cimex hemipterus (Cimicidae, Hemiptera) reveals tetraspanin expanded in bed bug ancestor |
Insect Sci |
2025 |
38830803
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Revisiting the backbone phylogeny and inferring the evolutionary trends in inflorescence of Elsholtzieae (Lamiaceae): new insights from orthologous nuclear genes |
Cladistics |
2025 |
39966307
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Phylotranscriptomic Analyses Resolve Evolutionary History of Eremopyrum (Triticeae; Poaceae) |
Ecol Evol |
2025 |
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Phylogenomics of angiosperms based on mitochondrial genes: insights into deep node relationships |
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2025 |
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The complete mitochondrial genome of Dama dama, and their phylogenetic relationships to other Cervidae |
Gene Reports |
2024 |
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Anatomy of a mega-radiation: Biogeography and niche evolution in Astragalus |
Am J Bot. |
2024 |
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Molecular phylogeny of deep-sea blind lobsters of the family Polychelidae (Decapoda: Polychelida), with implications for the origin and evolution of these ""living fossils |
Mol Phylogenet Evol. |
2024 |
38142793
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| Yu |
Genomic and transcriptomic studies on flavonoid biosynthesis in Lagerstroemia indica |
BMC Plant Biol |
2024 |
38443839
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| Lopes-Lima |
Integrative phylogenetic, phylogeographic and morphological characterisation of the Unio crassus species complex reveals cryptic diversity with important conservation implications |
Mol Phylogenet Evol |
2024 |
38447924
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Let's get high: Cladogenesis in freshwater crabs (Decapoda: Potamonautidae: Potamonautes) supports the mountain gradient speciation hypothesis in the Cape Fold and Drakensberg Mountains, South Africa |
Ecol Evol |
2024 |
38450318
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1 Tree
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Reinstatement of the fission yeast species Schizosaccharomyces versatilis Wickerham et Duprat, a sibling species of Schizosaccharomyces japonicus |
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2024 |
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When One Global Invasion Hides Another—Cryptic Interspecific Invasion in Freshwater Gastropods |
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2024 |
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Molecular phylogeny and historical biogeography of Iranian murids (Rodentia: Muridae) |
Mammalian Biology |
2024 |
Google Scholar
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The American Cherimoya Genome Reveals Insights into the Intra-Specific Divergence, the Evolution of Magnoliales, and a Putative Gene Cluster for Acetogenin Biosynthesis |
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2024 |
38475482
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An integrative approach clarifies species delimitation and biogeographic history of Debregeasia (Urticaceae) |
Plant Divers |
2024 |
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| Zuo |
A revised classification of Dryopteridaceae based on plastome phylogenomics and morphological evidence, with the description of a new genus, Pseudarachniodes |
Plant Diversity |
2024 |
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| Yu |
A cost-effective oligo-based barcode system for chromosome identification in longan and lychee |
Hortic Res |
2024 |
39845644
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1 Tree
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| Cai |
Complete Chloroplast Genomes and the Phylogenetic Analysis of Three Native Species of Paeoniaceae from the Sino-Himalayan Flora Subkingdom |
Int J Mol Sci |
2024 |
38203426
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1 Tree
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| Li |
Transcriptomic Analysis of Neocaridina denticulata sinensis Gills Following FPPS Knockdown Reveals Its Regulatory Role in Immune Response |
Int J Mol Sci |
2024 |
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Phylogenomic Insights into the Evolution and Origin of Nematoda |
Syst Biol. |
2024 |
39737664
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1 Tree
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| Alencar |
Deep genetic divergences and few morphological changes support the cryptic speciation in Larimus breviceps (Sciaenidae, Acanthuriformes) from the western South Atlantic |
Scientific Reports |
2024 |
39732967
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1 Tree
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| Wang |
Lonicera caerulea genome reveals molecular mechanisms of freezing tolerance and anthocyanin biosynthesis |
Journal of Advanced Research |
2024 |
39732333
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1 Tree
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| Lobón-Rovira |
Adaptive or non-adaptive? Cranial evolution in a radiation of miniaturized day geckos |
BMC Ecol Evol |
2024 |
39730989
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1 Tree
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| Tagliacollo |
Time-calibrated phylogeny of neotropical freshwater fishes |
Front Bioinform. |
2024 |
39711580
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1 Tree
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| Tamura |
Unraveling the potential structure of a Parnassius butterfly in Japan: Insights into the expansion history |
Mol Phylogenet Evol |
2024 |
39708989
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1 Tree
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| Villastrigo |
Plate tectonics, cold adaptation and long-distance range expansion to remote archipelagos and the high Andes as drivers of a circumantarctic freshwater arthropod radiation |
Mol Phylogenet Evol |
2024 |
39706232
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1 Tree
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| Singh |
Genome assembly of a nocturnal butterfly (Macrosoma leucophasiata) reveals convergent adaptation of visual genes |
Commun Biol |
2024 |
39702780
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1 Tree
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| Zheng |
Multi-omics analysis reveals the evolution, function, and regulatory mechanisms of SPF pheromones in Anurans |
Communnications Biology |
2024 |
39702418
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1 Tree
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| Stewart |
A time-calibrated salamander phylogeny including 765 species and 503 genes |
Mol Phylogenet Evol. |
2024 |
39681150
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1 Tree
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| Bossert |
Phylogeny, antiquity, and niche occupancy of Trinomia (Hymenoptera: Halictidae), an Afrotropical endemic genus of Nomiinae |
Mol Phylogenet Evol |
2024 |
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1 Tree
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| Gu |
Comparative chloroplast genomes analysis of nine Primulina (Gesneriaceae) rare species, from karst region of southwest China |
Sci Rep |
2024 |
39632936
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1 Tree
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| Bruning |
Phylogeography of Cold Water Soft Coral Alcyonium spp. (Anthozoa, Octocorallia: Alcyonacea) Between South America and the West Antarctic Peninsula |
Ecol Evol. |
2024 |
39629174
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1 Tree
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| Bortoluzzi |
Genome assembly of wisent (Bison bonasus) uncovers a deletion that likely inactivates the THRSP gene |
Commun Biol |
2024 |
39604663
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1 Tree
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| Sun |
Clam Genome and Transcriptomes Provide Insights into Molecular Basis of Morphological Novelties and Adaptations in Mollusks |
Biology |
2024 |
39596825
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1 Tree
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| Cai |
OHDLF: A Method for Selecting Orthologous Genes for Phylogenetic Construction and Its Application in the Genus Camellia |
genes |
2024 |
39596605
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1 Tree
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| Wang |
Spatiotemporal Pattern of a Macrofungal Genus Phylloporia (Basidiomycota) Revealing Its Adaptive Evolution in China |
J Fungi |
2024 |
39590699
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1 Tree
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| Chen |
Insight into the Phylogenetic Relationships of Phasmatodea and Selection Pressure Analysis of Phraortes liaoningensis Chen & He, 1991 (Phasmatodea: Lonchodidae) Using Mitogenomes |
Insects |
2024 |
39590457
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1 Tree
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| Gao |
Chromosome-level assembly of the Clinopodium gracile genome |
Front Plant Sci |
2024 |
39588084
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1 Tree
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| Cardoso |
Shifts in Chromosome Evolution Rates Shape the Karyotype Patterns of Leafcutting Ants |
Ecol Evol |
2024 |
39583040
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1 Tree
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| Hu |
Genome assembly of an endemic butterfly (Minois Aurata) shed light on the genetic mechanisms underlying ecological adaptation to arid valley habitat |
BMC Genomics |
2024 |
39580397
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1 Tree
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| Ying |
Mitochondrial Genome Comparison and Phylogenetic Variety of Four Morphologically Similar Bamboo Pests |
Ecol Evol |
2024 |
39568765
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1 Tree
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| Locatelli |
Chromosome-level genome assemblies and genetic maps reveal heterochiasmy and macrosynteny in endangered Atlantic Acropora |
BMC Genomics |
2024 |
39567907
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1 Tree
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| Rincon-Sandoval |
Ecological diversification of sea catfishes is accompanied by genome-wide signatures of positive selection |
Nat Commun. |
2024 |
39567489
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1 Tree
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| Yu |
Pan-genomic characterization and structural variant analysis reveal insights into spore development and species diversity in Ganoderma |
Microb Genom |
2024 |
39565084
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1 Tree
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| Bernal-Hernández |
Cryptic Diversity in Scorpaenodes xyris (Jordan & Gilbert 1882) (Scorpaeniformes: Scorpaenidae) Throughout the Tropical Eastern Pacific |
J Mol Evol |
2024 |
39550524
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1 Tree
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| Fortes |
Nuclear phylogenomics of Eperua (Leguminosae) highlights the role of habitat and morphological lability in dispersal and diversification across Amazonia and in the Caatinga-Cerrado ecotone. |
Mol Phylogenet Evol |
2024 |
39549976
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1 Tree
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| Wang |
Genomic evolution and patterns of horizontal gene transfer in Papilio |
Genomics |
2024 |
39542384
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1 Tree
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| Villastrigo |
Aridification and major geotectonic landscape change shaped an extraordinary species radiation across a world's extreme elevational gradient |
Commun Biol |
2024 |
39538007
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1 Tree
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| Liu |
Comparative Genomics Provides Insights into Adaptive Evolution and Demographics of Bats |
Mol Biol Evol |
2024 |
39530650
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1 Tree
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| Zhu |
Convergent Degenerated Regulatory Elements Associated with Limb Loss in Limbless Amphibians and Reptiles |
Mol Biol Evol |
2024 |
39530343
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1 Tree
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| Hao |
New molecular evidence of the genus Hydrurus (Chrysophyceae) and descriptions of Hydrurusfoetidus (Villars) Trevisan on the basis of morphology and phylogeny |
Biodivers Data J |
2024 |
39524496
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1 Tree
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| Liu |
A nearly gapless, highly contiguous reference genome for a doubled haploid line of Populus ussuriensis, enabling advanced genomic studies |
For Res (Fayettev) |
2024 |
39524412
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1 Tree
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| Zou |
Chromosome-level genome assembly of the ivory shell Babylonia areolata |
Sci Data |
2024 |
39505919
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1 Tree
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| Lyu |
Tracing the evolutionary and genetic footprints of atmospheric tillandsioids transition from land to air |
Nat Commun |
2024 |
39505856
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1 Tree
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| Zhang |
Comparison of the chloroplast genomics of nine endangered Habenaria species and phylogenetic analysis |
BMC Plant Biol. |
2024 |
39497089
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1 Tree
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| Zhang |
The tetraploid Camellia oleifera genome provides insights into evolution, agronomic traits, and genetic architecture of oil Camellia plants |
Cell Rep |
2024 |
39489937
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1 Tree
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| Zhao |
The complete mitochondrial genome of Dimorphopterus japonicus (Hidaka, 1959) (Hemiptera, Lygaeoidea) and phylogenetic relationships within the Lygaeoidea superfamily |
Sci Rep. |
2024 |
39487309
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1 Tree
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| Hu |
Comparative analysis of chloroplast genomes in ten holly (Ilex) species: insights into phylogenetics and genome evolution |
BMC Ecol Evol. |
2024 |
39478445
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1 Tree
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| Chang |
Comparative Mitogenomics Analysis Revealed Evolutionary Divergence among Purpureocillium Species and Gene Arrangement and Intron Dynamics of Ophiocordycipitaceae |
Microorganisms |
2024 |
39458362
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1 Tree
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| Guo |
Mitogenome-Based Phylogeny with Divergence Time Estimates Revealed the Presence of Cryptic Species within Heptageniidae (Insecta, Ephemeroptera) |
Insects |
2024 |
39452321
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1 Tree
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| Carruthers |
Repeated shifts out of tropical climates preceded by whole genome duplication |
New Phytol |
2024 |
39439297
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1 Tree
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| Jo |
High-quality chromosome-level genome assembly of female Artemia franciscana reveals sex chromosome and Hox gene organization |
Heliyon |
2024 |
39435060
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1 Tree
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| Yao |
Genome-wide species delimitation and quantification of the extent of introgression in eriophyoid mite Epitrimerus sabinae complex (Acariformes: Eriophyoidea) |
Mol Phylogenet Evol |
2024 |
39414099
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1 Tree
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| Felipe |
Molecular Phylogenetics and Historical Biogeography of Subtribe Ecliptinae (Asteraceae, Heliantheae) |
Plants |
2024 |
39409687
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1 Tree
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| Sun |
Sequence comparison of the mitochondrial genomes of five caridean shrimps of the infraorder Caridea: phylogenetic implications and divergence time estimation |
BMC Genomics |
2024 |
39407125
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1 Tree
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| Lee |
A multi-gene phylogeny of the Asian kukri snakes (Oligodon Fitzinger, 1826): Sharpening the blade of the second largest serpent radiation (Reptilia: Squamata: Colubridae) |
Mol Phylogenet Evol |
2024 |
39396561
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1 Tree
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| Brun |
A step in the deep evolution of Alvinellidae (Annelida: Polychaeta): A phylogenomic comparative approach based on transcriptomes |
Mol Phylogenet Evol |
2024 |
39393765
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1 Tree
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| Zhao |
Phylogenomic analyses of the pantropical Platycerium Desv. (Platycerioideae) reveal their complex evolution and historical biogeography |
Mol Phylogenet Evol |
2024 |
39393764
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1 Tree
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| Heuer |
Color polymorphic carnivores have faster speciation rates |
Sci Rep. |
2024 |
39390235
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1 Tree
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| Mu |
Molecular phylogenetic and estimation of evolutionary divergence and biogeography of the family Schizoparmaceae and allied families (Diaporthales, Ascomycota) |
Mol Phylogenet Evol |
2024 |
39368617
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1 Tree
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| Thompson |
Transcriptomic data support phylogenetic congruence and reveal genomic changes associated with the repeated evolution of annualism in aplocheiloid killifishes (Cyprinodontiformes) |
Mol Phylogenet Evol |
2024 |
39366593
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1 Tree
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| Dietz |
Museomics reveal origins of East African Pleophylla forest chafers and Miocene forest connectivity |
Mol Phylogenet Evol |
2024 |
39366592
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1 Tree
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| Liu |
Genome-wide survey of the bipartite structure and pathogenesis-related genes of Neostagonosporella sichuanensis, a causal agent of Fishscale bamboo rhombic-spot disease |
Front Microbiol |
2024 |
39360322
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1 Tree
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| Huang |
A genome assembly of decaploid Houttuynia cordata provides insights into the evolution of Houttuynia and the biosynthesis of alkaloids |
Hortic Res |
2024 |
39308792
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1 Tree
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| Becker |
A global blueberry phylogeny: Evolution, diversification, and biogeography of Vaccinieae (Ericaceae) |
Mol Phylogenet Evol |
2024 |
39288897
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1 Tree
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| Robinson |
An Improved Chromosome-scale Genome Assembly and Population Genetics resource for Populus tremula |
Physiol Plant |
2024 |
39279509
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1 Tree
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| Ge |
Phylogenomics resolves a 100-year-old debate regarding the evolutionary history of caddisflies (Insecta: Trichoptera) |
Mol Phylogenet Evol |
2024 |
39278385
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1 Tree
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| Pan |
Phylogenomic analysis of brachyuran crabs using transcriptome data reveals possible sources of conflicting phylogenetic relationships within the group |
Mol Phylogenet Evol |
2024 |
39278384
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1 Tree
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| Jiang |
Deciphering the evolution and biogeography of ant-ferns Lecanopteris s.s |
Mol Phylogenet Evol |
2024 |
39278383
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1 Tree
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| Fang |
Chromosome-level genome assembly of the forest pest Achelura yunnanensis (Lepidoptera: Zygaenidae) |
Sci Data |
2024 |
39266566
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1 Tree
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| Hansen |
Rapid Loss of Nutritional Symbionts in an Endemic Hawaiian Herbivore Radiation Is Associated with Plant Galling Habit |
Mol Biol Evol |
2024 |
39238368
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1 Tree
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| Yang |
A near-complete assembly of the Houttuynia cordata genome provides insights into the regulatory mechanism of flavonoid biosynthesis in Yuxingcao |
Plant Commun |
2024 |
39228129
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1 Tree
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| Dou |
Histological and transcriptomic insights into the interaction between grapevine and Colletotrichum viniferum |
Front Plant Sci |
2024 |
39220012
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1 Tree
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| Wang |
Phylogenomics resolves the backbone of Poales and identifies signals of hybridization and polyploidy |
Mol Phylogenet Evol |
2024 |
39209045
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1 Tree
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| Saunders |
Tangled webs and spider-flowers: Phylogenomics, biogeography, and seed morphology inform the evolutionary history of Cleomaceae |
Am J Bot |
2024 |
39206557
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1 Tree
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| Chen |
Chromosome-scale genome assembly reveals insights into the evolution and ecology of the harmful algal bloom species Phaeocystis globosa Scherffel |
iScience |
2024 |
39193189
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1 Tree
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| Tian |
Rapid in situ diversification rates in Rhamnaceae explain the parallel evolution of high diversity in temperate biomes from global to local scales |
New Phytol |
2024 |
38229185
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1 Tree
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| Wang |
Chromosome-level genome assemblies reveal genome evolution of an invasive plant Phragmites australis |
Commun Biol |
2024 |
39154094
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1 Tree
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| Yang |
Host and venom evolution in parasitoid wasps: does independently adapting to the same host shape the evolution of the venom gland transcriptome? |
BMC Biol |
2024 |
39148049
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1 Tree
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| Wang |
Genomic Anatomy of Homozygous XX Females and YY Males Reveals Early Evolutionary Trajectory of Sex-determining Gene and Sex Chromosomes in Silurus Fishes |
Mol Biol Evol |
2024 |
39136558
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1 Tree
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| Tseng |
The role of deep hybridization in fern speciation: Examples from the Thelypteridaceae |
Am J Bot. |
2024 |
39135339
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1 Tree
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| Hofmann |
The last of their kind: Is the genus Scutiger (Anura: Megophryidae) a relict element of the paleo-Transhimalaya biota? |
Mol Phylogenet Evol |
2024 |
39127262
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1 Tree
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| Weinell |
Novel phylogenomic inference and 'Out of Asia' biogeography of cobras, coral snakes and their allies |
R Soc Open Sci |
2024 |
39113776
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1 Tree
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| Lv |
The gapless genome assembly and multi-omics analyses unveil a pivotal regulatory mechanism of oil biosynthesis in the olive tree |
Hortic Res |
2024 |
39108575
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1 Tree
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| Adrián-Serrano |
A targeted gene phylogenetic framework to investigate diversification in the highly diverse yet geographically restricted red devil spiders (Araneae, Dysderidae) |
Cladistics |
2024 |
39105704
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1 Tree
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| Li |
Unravelling the novel sex determination genotype with 'ZY' and a distinctive 2.15-2.95 Mb inversion among poplar species through haplotype-resolved genome assembly and comparative genomics analysis |
Mol Ecol Resour |
2024 |
39092596
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1 Tree
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| Gao |
The centromere landscapes of four karyotypically diverse Papaver species provide insights into chromosome evolution and speciation |
Cell Genom |
2024 |
39084227
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1 Tree
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| Ogutcen |
Phylogenetic insights into the Salicaceae: The evolution of willows and beyond |
Mol Phylogenet Evol |
2024 |
39079595
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1 Tree
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| Li |
Evolution across the adaptive landscape in a hyperdiverse beetle radiation |
Curr Biol. |
2024 |
39067451
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1 Tree
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| Russo |
Genome of the early spider-orchid Ophrys sphegodes provides insights into sexual deception and pollinator adaptation |
Nat Commun. |
2024 |
39060266
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1 Tree
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| Zhou |
Evolutionary patterns and functional effects of 3D chromatin structures in butterflies with extensive genome rearrangements |
Nat Commun. |
2024 |
39060230
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1 Tree
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| Gable |
Differential Conservation and Loss of Chicken Repeat 1 (CR1) Retrotransposons in Squamates Reveal Lineage-Specific Genome Dynamics Across Reptiles |
Genome Biol Evol. |
2024 |
39031594
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1 Tree
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| Bessa |
Whole genome phylogenomics helps to resolve the phylogenetic position of the Zygothrica genus group (Diptera, Drosophilidae) and the causes of previous incongruences |
Mol Phylogenet Evol |
2024 |
39025321
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1 Tree
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| Jiu |
Haplotype-resolved genome assembly for tetraploid Chinese cherry (Prunus pseudocerasus) offers insights into fruit firmness |
Hortic Res |
2024 |
38988622
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1 Tree
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| Yan |
A multiscale analysis of coralline algae Lithophylloideae (Corallinophycidae, Rhodophyta) shedding new light on understanding cryptic diversity |
Mol Phylogenet Evol |
2024 |
38981554
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1 Tree
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| Zhang |
Telomere-to-telomere Citrullus super-pangenome provides direction for watermelon breeding |
Nat Genet |
2024 |
38977857
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1 Tree
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| Liao |
Phylogenomic insights into the historical biogeography, character-state evolution, and species diversification rates of Cypripedioideae (Orchidaceae) |
Mol Phylogenet Evol |
2024 |
38977041
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1 Tree
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| Wutke |
Phylogenomics and biogeography of sawflies and woodwasps (Hymenoptera, Symphyta) |
Mol Phylogenet Evol |
2024 |
38972494
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1 Tree
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| Gao |
Chromosome-level genome assembly of Ajuga decumbens |
Front Plant Sci |
2024 |
38962248
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Genomic incongruence accompanies the evolution of flower symmetry in Eudicots: a case study in the poppy family (Papaveraceae, Ranunculales) |
Front Plant Sci. |
2024 |
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| Hogg |
Extant and extinct bilby genomes combined with Indigenous knowledge improve conservation of a unique Australian marsupial |
Nat Ecol Evol. |
2024 |
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| Liu |
Eco-evolutionary evidence for the global diversity pattern of Cycas (Cycadaceae) |
J Integr Plant Biol. |
2024 |
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| Zhu |
Firefly toxin lucibufagins evolved after the origin of bioluminescence |
PMAS Nexus |
2024 |
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| Rakotoarivelo |
Complex patterns of gene flow and convergence in the evolutionary history of the spiral-horned antelopes (Tragelaphini) |
Mol Phylogenet Evol |
2024 |
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| Lindstrom |
Transcriptome sequencing data provide a solid base to understand the phylogenetic relationships, biogeography and reticulated evolution of the genus Zamia L. (Cycadales: Zamiaceae) |
Ann Bot |
2024 |
38900840
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| Sless |
Phylogenomics and biogeography of the small carpenter bees (Apidae: Xylocopinae: Ceratina) |
Mol Phylogenet Evol |
2024 |
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| Li |
Genome-wide analysis reveals the contributors to fast molecular evolution of the Chinese hook snout carp (Opsariichthys bidens) |
Comput Struct Biotechnol J |
2024 |
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| Ferrari |
The nuclear and mitochondrial genome assemblies of Tetragonisca angustula (Apidae: Meliponini), a tiny yet remarkable pollinator in the Neotropics |
BMC Genomics |
2024 |
38862915
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| Boom |
Phylogenomics of Brachystegia: Insights into the origin of African miombo woodlands |
Am J Bot. |
2024 |
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| Chen |
Integrative taxonomy, phylogenetics and historical biogeography of subgenus Aeschyntelus Stål, 1872 (Hemiptera: Heteroptera: Rhopalidae) |
Mol Phylogenet Evol |
2024 |
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1 Tree
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| Zhang |
Phylogenetic analysis and divergence time estimation of Lycium species in China based on the chloroplast genomes |
BMC Genomics |
2024 |
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1 Tree
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| Coelho |
Comparative genomics of the closely related fungal genera Cryptococcus and Kwoniella reveals karyotype dynamics and suggests evolutionary mechanisms of pathogenesis |
PLoS Biol |
2024 |
38843310
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1 Tree
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| Ciborowski |
Decoding Evolution of Rubioideae: Plastomes Reveal Sweet Secrets of Codon Usage, Diagnostides, and Superbarcoding |
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2024 |
38790191
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1 Tree
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| Lecocq |
Ecological diversification preceded geographical expansion during the evolutionary radiation of Cataglyphis desert ants |
iScience |
2024 |
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1 Tree
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| Jiang |
Dynamics and timing of diversification events of ciliated eukaryotes from a large phylogenomic perspective |
Mol Phylogenet Evol |
2024 |
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| Xue |
Radiating diversification and niche conservatism jointly shape the inverse latitudinal diversity gradient of Potentilla L. (Rosaceae) |
BMC Plant Biol |
2024 |
38778263
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| Yang |
Signatures of Adaptation and Purifying Selection in Highland Populations of Dasiphora fruticosa |
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2024 |
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| Xiao |
Chromosome-level genome assemblies of Musa ornata and Musa velutina provide insights into pericarp dehiscence and anthocyanin biosynthesis in banana |
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2024 |
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| Li |
Multiomics analyses provide insights into the genomic basis of differentiation among four sweet osmanthus groups |
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2024 |
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| Cheng |
The role of Pleistocene dispersal in shaping species richness of sky island wintergreens from the Himalaya-Hengduan Mountains |
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2024 |
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Phylogenetic placement and comparative analysis of the mitochondrial genomes of Idiostoloidea (Hemiptera: Heteroptera) |
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2024 |
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Phylogenomic Discordance is Driven by Wide-Spread Introgression and Incomplete Lineage Sorting During Rapid Species Diversification Within Rattlesnakes (Viperidae: Crotalus and Sistrurus) |
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Molecular phylogeny and divergence time of Harpalyce (Leguminosae, Papilionoideae), a lineage with amphitropical diversification in seasonally dry forests and savannas |
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2024 |
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Phylogenomics and biogeographical diversification of Collabieae (Orchidaceae) and its implication in the reconstruction of the dynamic history of Asian evergreen broadleaved forests |
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Diversity and biogeography of South American mud turtles elucidated by multilocus DNA sequencing (Testudines: Kinosternidae) |
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2024 |
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Comprehensive genome assembly reveals genetic diversity and carcass consumption insights in critically endangered Asian king vultures |
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2024 |
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| Plessy |
Extreme genome scrambling in marine planktonic Oikopleura dioica cryptic species |
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Genetic differentiation and phylogeography of Erythroneurini (Hemiptera, Cicadellidae, Typhlocybinae) in the southwestern karst area of China |
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Telomere-to-telomere genome assembly of Oldenlandia diffusa |
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Decoding the genome of bloodsucking midge Forcipomyia taiwana (Diptera: Ceratopogonidae): Insights into odorant receptor expansion |
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Species divergence in valleys: the phylogeny of Phrynocephalus forsythii complex and description of a new species |
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A near-complete genome assembly of Monochamus alternatus a major vector beetle of pinewood nematode |
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Whole-genome sequencing of allotetraploid bermudagrass reveals the origin of Cynodon and candidate genes for salt tolerance |
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Deep divergences among inconspicuously colored clades of Epipedobates poison frogs |
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Recent genetic, phenetic and ecological divergence across the Mesoamerican highlands: a study case with Diglossa baritula (Aves: Thraupidae) |
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The genome of the colonial hydroid Hydractinia reveals that their stem cells use a toolkit of evolutionarily shared genes with all animals |
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Comprehensive phylogeny of Pieridae butterflies reveals strong correlation between diversification and temperature |
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New insights into the molecular phylogeny, biogeographical history, and diversification of Amblyomma ticks (Acari: Ixodidae) based on mitogenomes and nuclear sequences |
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Decryption of the survival ""black box"": gene family expansion promotes the encystment in ciliated protists |
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The super-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread forest trees |
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Gene Rearrangements in the Mitochondrial Genome of Gonatopsis borealis and Onychoteuthis compacta Reveal Their Phylogenetic Implications for Oegopsida |
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Traditional multilocus phylogeny fails to fully resolve Palearctic ground squirrels (Spermophilus) relationships but reveals a new species endemic to West Siberia |
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Comparative plastome analysis of the sister genera Ceratocephala and Myosurus (Ranunculaceae) reveals signals of adaptive evolution to arid and aquatic environments |
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Marine introgressions and Andean uplift have driven diversification in neotropical Monkey tree frogs (Anura, Phyllomedusinae) |
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Phylogenomics and the rise of the angiosperms |
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Cutting the sap: First molecular phylogeny of twig-girdler longhorn beetles (Coleoptera: Cerambycidae: Lamiinae: Onciderini) suggests shifts in host plant attack behaviours contributed to morphological evolution |
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Synergistic innovations enabled the radiation of anglerfishes in the deep open ocean |
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Phylogeny and historical biogeography of the swallow family (Hirundinidae) inferred from comparisons of thousands of UCE loci |
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Phylogeny and divergence time estimation of Io moths and relatives (Lepidoptera: Saturniidae: Automeris) |
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Challenge accepted: Evolutionary lineages versus taxonomic classification of North American shrub willows (Salix) |
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Morphological observation, molecular identification and evolutionary analysis of Hydatigera kamiyai found in Neodon fuscus from the Qinghai-Tibetan plateau |
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Plastid phylogenomics reveals evolutionary relationships in the mycoheterotrophic orchid genus Dipodium and provides insights into plastid gene degeneration |
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Insights from the first phylogenomic analysis of flat wasps (Hymenoptera, Bethylidae) reveal two new subfamilies |
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Exploring the phylogeny and depth evolution of cusk eels and their relatives (Ophidiiformes: Ophidioidei) |
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Chromosomal-level genome assembly of Hylurgus ligniperda: insights into host adaptation and environmental tolerance |
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A molecular phylogeny of the Petaluridae (Odonata: Anisoptera): A 160-Million-Year-Old story of drift and extinction |
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Comparative analysis of 12 water lily plastid genomes reveals genomic divergence and evolutionary relationships in early flowering plants |
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The mitochondrial genome of the critically endangered enigmatic Kazakhstani endemic Selevinia betpakdalaensis (Rodentia: Gliridae) and its phylogenetic relationships with other dormouse species |
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The Mitochondrial Genome of Melipona fasciculata (Apidae, Meliponini): Genome Organization and Comparative Analyses, Phylogenetic Implications and Divergence Time Estimations |
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A molecular phylogeny for all 21 families within Chiroptera (bats) |
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Comparative and population genomics of buckwheat species reveal key determinants of flavor and fertility |
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Frog phylogeny: A time-calibrated, species-level tree based on hundreds of loci and 5,242 species |
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Phylogenomic and population genomic analyses reveal the spatial-temporal dynamics of diversification of the Nigella arvensis complex (Ranunculaceae) in the Aegean archipelago |
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Shift in symbiotic lifestyle as the major process shaping the evolution of pea crabs (Decapoda: Brachyura: Pinnotheroidea) |
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Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet |
Cell |
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Major Revisions in Pancrustacean Phylogeny and Evidence of Sensitivity to Taxon Sampling |
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Outline, phylogenetic and divergence times analyses of the genus Haploporus (Polyporales, Basidiomycota): two new species are proposed |
MycoKeys |
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Ultraconserved elements resolve phylogenetic relationships and biogeographic history of African-Malagasy bent-winged bats (Miniopterus) |
Mol Phylogenet Evol |
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Molecular Evidence Supports Five Lineages within Chiropotes (Pitheciidae, Platyrrhini) |
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2023 |
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The evolutionary history of bees in time and space |
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2023 |
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Strategies of diaspore dispersal investment in Compositae: the case of the Andean highlands |
Ann Bot. |
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Rearranging and completing the puzzle: Phylogenomic analysis of bark beetles Dendroctonus reveals new hypotheses about genus diversification |
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Updated phylogeny of Vestimentifera (Siboglinidae, Polychaeta, Annelida) based on mitochondrial genomes, with a new species |
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2023 |
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East Asian-North American disjunctions and phylogenetic relationships within subtribe Nepetinae (Lamiaceae) |
Mol Phylogenet Evol |
2023 |
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Speciation across the Earth driven by global cooling in terrestrial orchids |
Proc Natl Acad Sci U S A |
2023 |
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Molecular phylogenetics of the fresh water sleepers Odontobutis (Gobiiformes: Odontobutidae) and its implications on biogeography of freshwater ichthyofauna of East Asia |
Mol Phylogenet Evol |
2023 |
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Phylogenetic analysis and temporal diversification of the tribe Alsineae (Caryophyllaceae) with the description of three new genera, Hesperostellaria, Reniostellaria and Torreyostellaria |
Front Plant Sci. |
2023 |
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Integrative systematics and evolutionary history of Berylmys bowersi (Mammalia, Rodentia, Muridae) |
Ecol Evol |
2023 |
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Biogeographic diversification of Actaea (Ranunculaceae): Insights into the historical assembly of deciduous broad-leaved forests in the Northern Hemisphere |
Mol Phylogenet Evol |
2023 |
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Echoes of ancient introgression punctuate stable genomic lineages in the evolution of figs |
Proc Natl Acad Sci U S A |
2023 |
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1 Tree
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The synergy of abiotic and biotic factors correlated with diversification of Fumarioideae (Papaveraceae) in the Cenozoic |
Mol Phylogenet Evol |
2023 |
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Parallel and convergent genomic changes underlie independent subterranean colonization across beetles |
Nat Commun. |
2023 |
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The Metasequoia genome and evolutionary relationships among redwoods |
Plant Commun |
2023 |
37381601
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Transcriptome-Based Study on the Phylogeny and Hybridization of Marattialean Ferns (Marattiaceae) |
Plants |
2023 |
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Molecular Structure and Variation Characteristics of the Plastomes from Six Malus baccata (L.) Borkh. Individuals and Comparative Genomic Analysis with Other Malus Species |
Biomolecules |
2023 |
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Molecular phylogeny, historical biogeography, and classification of Pseudocoladenia butterflies (Lepidoptera: Hesperiidae) |
Mol Phylogenet Evol |
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Phylogenomics, evolution of trophic traits and divergence times of hemiodontid fishes (Ostariophysi: Characiformes) |
Mol Phylogenet Evol |
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The genome of Acorus deciphers insights into early monocot evolution |
Nat Commun. |
2023 |
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Large-scale snake genome analyses provide insights into vertebrate development |
Cell |
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Phylogeny and diversification of planthoppers (Hemiptera: Fulgoromorpha) based on a comprehensive molecular dataset and large taxon sampling |
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Genomic data provide a robust phylogeny backbone for Rhodiola L. (Crassulaceae) and reveal extensive reticulate evolution during its rapid radiation |
Mol Phylogenet Evol |
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Species richness disparity in tropical terrestrial herbaceous floras: Evolutionary insight from Collabieae (Orchidaceae) |
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Diversification of the sleepers (Gobiiformes: Gobioidei: Eleotridae) and evolution of the root gobioid families |
Mol Phylogenet Evol |
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Bewildering biogeography: Waves of dispersal and diversification across southern Wallacea by bent-toed geckos (genus: Cyrtodactylus) |
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Reconciling fossils with phylogenies reveals the origin and macroevolutionary processes explaining the global cycad biodiversity |
New Phytol |
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The phylogenomic and biogeographic history of the gartersnakes, watersnakes, and allies (Natricidae: Thamnophiini) |
Mol Phylogenet Evol |
2023 |
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Chromosome-level genome assembly of Salvia miltiorrhiza with orange roots uncovers the role of Sm2OGD3 in catalyzing 15,16-dehydrogenation of tanshinones |
Hortic Res |
2023 |
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Phylogeny and historical biogeography of neotropical catfishes Trichomycterus (Siluriformes: Trichomycteridae) from eastern Brazil |
Mol Phylogenet Evol |
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1 Tree
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Comparative genomics provides insights into the phylogeny and environmental adaptations of Peritrichia (Protista, Ciliophora) - A potential resource for environmental pollution control and bioremediation |
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Australia's hidden radiation: Phylogenomics analysis reveals rapid Miocene radiation of blindsnakes |
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A plastome phylogeny of Rumex (Polygonaceae) illuminates the divergent evolutionary histories of docks and sorrels |
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The origin of the world’s smallest flightless bird, the Inaccessible Island Rail Atlantisia rogersi (Aves: Rallidae) |
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Genomic Signals of Adaptation towards Mutualism and Sociality in Two Ambrosia Beetle Complexes |
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A phylogenomic framework, evolutionary timeline and genomic resources for comparative studies of decapod crustaceans |
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A phylogenomic rodent tree reveals the repeated evolution of masseter architectures |
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Seed size evolution and biogeography of Plukenetia (Euphorbiaceae), a pantropical genus with traditionally cultivated oilseed species |
BMC evolutionary biology |
2019 |
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The role of climatic cycles and trans-Saharan migration corridors in species diversification: Biogeography of Psammophis schokari group in North Africa. |
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Plastome sequences and exploration of tree-space help to resolve the phylogeny of riceflowers (Thymelaeaceae: Pimelea). |
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Neither barriers nor refugia explain genetic structure in a major biogeographic break: phylogeography of praying mantises in the Brazilian Atlantic Forest. |
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Testing the Role of the Red Queen and Court Jester as Drivers of the Macroevolution of Apollo Butterflies. |
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Historical biogeography of Loranthaceae (Santalales): Diversification agrees with emergence of tropical forests and radiation of songbirds. |
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From America to Eurasia: a multigenomes history of the genus Abies. |
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Phylogeny and biogeography of the African burrowing snake subfamily Aparallactinae (Squamata: Lamprophiidae). |
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Early insularity and subsequent mountain uplift were complementary drivers of diversification in a Melanesian lizard radiation (Gekkonidae: Cyrtodactylus). |
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Mol Phylogenet Evol |
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Evolution of sexual systems and growth habit in Mussaenda (Rubiaceae): Insights into the evolutionary pathways of dioecy. |
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Repeated biome transitions in the evolution of Australian rodents. |
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Transcriptome sequence-based phylogeny of chalcidoid wasps (Hymenoptera: Chalcidoidea) reveals a history of rapid radiations, convergence, and evolutionary success. |
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Climate and host-plant associations shaped the evolution of ceutorhynch weevils throughout the Cenozoic. |
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An ant genus-group (Prenolepis) illuminates the biogeography and drivers of insect diversification in the Indo-Pacific. |
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Comparative Characterization of the Complete Mitochondrial Genomes of the Three Apple Snails (Gastropoda: Ampullariidae) and the Phylogenetic Analyses |
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Neutral Theory: From Complex Population History to Natural Selection and Sociocultural Phenomena in Human Populations. |
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Cryptic genetic diversity, population structure, and gene flow in the Mojave rattlesnake (Crotalus scutulatus). |
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Origins and evolution of cinnamon and camphor: A phylogenetic and historical biogeographical analysis of the Cinnamomum group (Lauraceae). |
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2016 |
26718058
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1 Tree
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| Moussalli |
Deep molecular divergence and exceptional morphological stasis in dwarf cannibal snails Nata sensu lato Watson, 1934 (Rhytididae) of southern Africa. |
Mol Phylogenet Evol |
2016 |
26619925
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1 Tree
|
| Dedeine |
Historical biogeography of Reticulitermes termites (Isoptera: Rhinotermitidae) inferred from analyses of mitochondrial and nuclear loci. |
Mol Phylogenet Evol |
2016 |
26541239
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1 Tree
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| Gehrke |
The evolution of dwarf shrubs in alpine environments: a case study of Alchemilla in Africa. |
Ann Bot |
2016 |
26520565
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1 Tree
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| Sanciangco |
Phylogenetic placement of enigmatic percomorph families (Teleostei: Percomorphaceae). |
Mol Phylogenet Evol |
2016 |
26493227
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1 Tree
|
| Zheng |
Combining phylogenomic and supermatrix approaches, and a time-calibrated phylogeny for squamate reptiles (lizards and snakes) based on 52 genes and 4162 species. |
Mol Phylogenet Evol |
2016 |
26475614
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1 Tree
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Molecular data reveal spatial and temporal patterns of diversification and a cryptic new species of lowland Stenocercus Duméril & Bibron, 1837 (Squamata: Tropiduridae). |
Mol Phylogenet Evol |
2016 |
26432394
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1 Tree
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Phylogenetic relationships and the evolution of BMP4 in triggerfishes and filefishes (Balistoidea). |
Mol Phylogenet Evol |
2016 |
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1 Tree
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Multi-locus phylogeny and divergence time estimates of Enallagma damselflies (Odonata: Coenagrionidae). |
Mol Phylogenet Evol |
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The Evolutionary History of Pagamea (Rubiaceae), a White‐sand Specialist Lineage in Tropical South America |
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Evolutionary and biogeographical history of the land snail family Urocoptidae (Gastropoda: Pulmonata) across the Caribbean region |
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India–Madagascar vicariance explains cascade beetle biogeography |
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Evolution of Pacific Rim diving beetles sheds light on Amphi‐Pacific biogeography |
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Pleistocene climatic fluctuations explain the disjunct distribution and complex phylogeographic structure of the Southern Red-backed Salamander, Plethodon serratus |
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Old but not ancient: coalescent species tree of New Caledonian geckos reveals recent post‐inundation diversification |
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Pinpointing the level of isolation between two cryptic species sharing the same microhabitat: a case study with a scarabaeid species complex |
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The importance of long‐distance dispersal and establishment events in small insects: historical biogeography of metalmark moths (Lepidoptera, Choreutidae) |
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Spatiotemporal diversification of a low‐vagility Neotropical vertebrate clade (short‐tailed opossums, Didelphidae: Monodelphis) |
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Quaternary vicariance of tiger beetle, Cicindela chinensis, in Ryukyu, Japan, Taiwan and Korea–China |
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Molecular phylogeography of four endemic Sagittaria species (Alismataceae) in the Sino‐Japanese Floristic Region of East Asia |
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New scenario for speciation in the benthic dinoflagellate genus Coolia (Dinophyceae) |
Harmful Algae |
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Disentangling the Phylogeny of Isoetes (Isoetales), Using Nuclear and Plastid Data |
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Phylogenetic analyses of Spiraea (Rosaceae) distributed in the Qinghai-Tibetan Plateau and adjacent regions: insights from molecular data |
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Budding speciation via peripheral isolation: the Psorodonotus venosus (Orthoptera, Tettigoniidae) species group example |
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The role of wet‐zone fragmentation in shaping biodiversity patterns in peninsular India: insights from the caecilian amphibian Gegeneophis |
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Unmasking alpha diversity, cladogenesis and biogeographical patterning in an ancient panarthropod lineage (Onychophora: Peripatopsidae: Opisthopatus cinctipes) with the description of five novel species |
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Andean uplift drives diversification of the bothriurid scorpion genus Brachistosternus |
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Cleaners among wrasses: Phylogenetics and evolutionary patterns of cleaning behavior within Labridae |
Mol Phylogenet Evol |
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Separate histories in both sides of the Mediterranean: phylogeny and niche evolution of ocellated lizards |
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The complete chloroplast genome of Gracilariopsis lemaneiformis (Rhodophyta) gives new insight into the evolution of family Gracilariaceae. |
J Phycol |
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Correction: On the Evolutionary History of Uleiella chilensis, a Smut Fungus Parasite of Araucaria araucana in South America: Uleiellales ord. nov. in Ustilaginomycetes. |
PLoS One |
2016 |
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Evolution of East Asia's Arcto-Tertiary relict Euptelea (Eupteleaceae) shaped by Late Neogene vicariance and Quaternary climate change. |
BMC Evol Biol |
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Phylogenomics of a rapid radiation: is chromosomal evolution linked to increased diversification in north american spiny lizards (Genus Sceloporus)? |
BMC Evol Biol |
2016 |
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Putting scales into evolutionary time: the divergence of major scale insect lineages (Hemiptera) predates the radiation of modern angiosperm hosts. |
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The abiotic and biotic drivers of rapid diversification in Andean bellflowers (Campanulaceae). |
New Phytol |
2016 |
26990796
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1 Tree
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| Torres-Carvajal |
Phylogeny and biogeography of the most diverse clade of South American gymnophthalmid lizards (Squamata, Gymnophthalmidae, Cercosaurinae). |
Mol Phylogenet Evol |
2016 |
26975692
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1 Tree
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Genetic diversity and population genetics of the warble flies Hypoderma bovis and H. sinense in Qinghai Province, China. |
Parasit Vectors |
2016 |
26969624
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1 Tree
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| Santini |
Phylogeny and biogeography of hogfishes and allies (Bodianus, Labridae). |
Mol Phylogenet Evol |
2016 |
26944013
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1 Tree
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| Waku |
Evaluating the Phylogenetic Status of the Extinct Japanese Otter on the Basis of Mitochondrial Genome Analysis. |
PLoS One |
2016 |
26938434
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Phylogenetic relationships of the New World titi monkeys (Callicebus): first appraisal of taxonomy based on molecular evidence. |
Front Zool |
2016 |
26937245
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Complete Plastid Genome of the Recent Holoparasite Lathraea squamaria Reveals Earliest Stages of Plastome Reduction in Orobanchaceae. |
PLoS One |
2016 |
26934745
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1 Tree
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| Yao |
Phylogenetic relationships, character evolution and biogeographic diversification of Pogostemon s.l. (Lamiaceae). |
Mol Phylogenet Evol |
2016 |
26923493
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1 Tree
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| Zhang |
Genome-wide introgression among distantly related Heliconius butterfly species. |
Genome Biol |
2016 |
26921238
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1 Tree
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| Junqueira |
Large-scale mitogenomics enables insights into Schizophora (Diptera) radiation and population diversity. |
Sci Rep |
2016 |
26912394
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1 Tree
|
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The historical biogeography of groupers: Clade diversification patterns and processes. |
Mol Phylogenet Evol |
2016 |
26908372
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1 Tree
|
| Ito |
A new delimitation of the Afro-Eurasian plant genus Althenia to include its Australasian relative, Lepilaena (Potamogetonaceae) - Evidence from DNA and morphological data. |
Mol Phylogenet Evol |
2016 |
26899346
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1 Tree
|
| Culumber |
Ecological divergence and conservatism: spatiotemporal patterns of niche evolution in a genus of livebearing fishes (Poeciliidae: Xiphophorus). |
BMC Evol Biol |
2016 |
26895994
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1 Tree
|
| Roalson |
Distinct Processes Drive Diversification in Different Clades of Gesneriaceae. |
Syst Biol |
2016 |
26880147
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1 Tree
|
| Persons |
Sorting out relationships among the grouse and ptarmigan using intron, mitochondrial, and ultra-conserved element sequences. |
Mol Phylogenet Evol |
2016 |
26879712
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1 Tree
|
| Chen |
Multi-locus analysis supports the taxonomic validity of Arborophila gingica guangxiensis Fang Zhou & Aiwu Jiang, 2008. |
Zookeys |
2016 |
26877690
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1 Tree
|
| Emata |
From the mountains to the coast and back again: Ancient biogeography in a radiation of short-range endemic harvestmen from California. |
Mol Phylogenet Evol |
2016 |
26876666
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1 Tree
|
| Che |
A global molecular phylogeny and timescale of evolution for Cryptocercus woodroaches. |
Mol Phylogenet Evol |
2016 |
26876638
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1 Tree
|
| Zhao |
The complete mitochondrial genome of the Tibetan fox (Vulpes ferrilata) and implications for the phylogeny of Canidae. |
C R Biol |
2016 |
26868757
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1 Tree
|
| Rojas |
Bats (Chiroptera: Noctilionoidea) Challenge a Recent Origin of Extant Neotropical Diversity. |
Syst Biol |
2016 |
26865275
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1 Tree
|
| Crowl |
A global perspective on Campanulaceae: Biogeographic, genomic, and floral evolution. |
Am J Bot |
2016 |
26865121
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1 Tree
|
| Jiang |
Taxonomic status and molecular phylogeography of two sibling species of Polytremis (Lepidoptera: Hesperiidae). |
Sci Rep |
2016 |
26860271
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1 Tree
|
| Schneider |
Pleistocene radiation of the serpentine-adapted genus Hesperolinon and other divergence times in Linaceae (Malpighiales). |
Am J Bot |
2016 |
26851267
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1 Tree
|
| Edwards |
Assessing models of speciation under different biogeographic scenarios; an empirical study using multi-locus and RNA-seq analyses. |
Ecol Evol |
2016 |
26843925
|
1 Tree
|
| Lerp |
Phylogenetic analyses of gazelles reveal repeated transitions of key ecological traits and provide novel insights into the origin of the genus Gazella. |
Mol Phylogenet Evol |
2016 |
26826603
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1 Tree
|
| Dool |
Nuclear introns outperform mitochondrial DNA in inter-specific phylogenetic reconstruction: Lessons from horseshoe bats (Rhinolophidae: Chiroptera). |
Mol Phylogenet Evol |
2016 |
26826601
|
1 Tree
|
| Chen |
Genomic Analyses Reveal Demographic History and Temperate Adaptation of the Newly Discovered Honey Bee Subspecies Apis mellifera sinisxinyuan n. ssp. |
Mol Biol Evol |
2016 |
26823447
|
1 Tree
|
| Majtánová |
Asexual Reproduction Does Not Apparently Increase the Rate of Chromosomal Evolution: Karyotype Stability in Diploid and Triploid Clonal Hybrid Fish (Cobitis, Cypriniformes, Teleostei). |
PLoS One |
2016 |
26808475
|
1 Tree
|
| Blair |
Diversity-dependent cladogenesis throughout western Mexico: Evolutionary biogeography of rattlesnakes (Viperidae: Crotalinae: Crotalus and Sistrurus). |
Mol Phylogenet Evol |
2016 |
26802208
|
1 Tree
|
| Alvarado |
Phylogenetic overview of the genus Genea (Pezizales, Ascomycota) with an emphasis on European taxa. |
Mycologia |
2016 |
26740538
|
1 Tree
|
| Yang |
The Sinocyclocheilus cavefish genome provides insights into cave adaptation. |
BMC Biol |
2016 |
26728391
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1 Tree
|
| Romero |
Molecular phylogeny of the Ellobiidae (Gastropoda: Panpulmonata) supports independent terrestrial invasions. |
Mol Phylogenet Evol |
2016 |
26724408
|
1 Tree
|
| Cusimano |
Massive intracellular gene transfer during plastid genome reduction in nongreen Orobanchaceae. |
New Phytol |
2016 |
26671255
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1 Tree
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| Watts |
Where do the Neotropical Empidini lineages (Diptera: Empididae: Empidinae) fit in a worldwide context? |
Mol Phylogenet Evol |
2016 |
26642824
|
1 Tree
|
| Herden |
Phylogeny of Allium L. subgenus Anguinum (G. Don. ex W.D.J. Koch) N. Friesen (Amaryllidaceae). |
Mol Phylogenet Evol |
2016 |
26639102
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1 Tree
|
| Munakata |
Phylogenetic Position and Molecular Chronology of a Colonial Green Flagellate, Stephanosphaera pluvialis (Volvocales, Chlorophyceae), among Unicellular Algae. |
J Eukaryot Microbiol |
2016 |
26595722
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1 Tree
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| Gibb |
Shotgun Mitogenomics Provides a Reference Phylogenetic Framework and Timescale for Living Xenarthrans. |
Mol Biol Evol |
2016 |
26556496
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1 Tree
|
| Melo |
Molecular phylogeny of the Neotropical fish genus Tetragonopterus (Teleostei: Characiformes: Characidae). |
Mol Phylogenet Evol |
2016 |
26541240
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1 Tree
|
| Nie |
Recent assembly of the global herbaceous flora: evidence from the paper daisies (Asteraceae: Gnaphalieae). |
New Phytol |
2016 |
26528674
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1 Tree
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| Huang |
Resolution of Brassicaceae Phylogeny Using Nuclear Genes Uncovers Nested Radiations and Supports Convergent Morphological Evolution. |
Mol Biol Evol |
2016 |
26516094
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1 Tree
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| Villarreal A |
Divergence times and the evolution of morphological complexity in an early land plant lineage (Marchantiopsida) with a slow molecular rate. |
New Phytol |
2016 |
26505145
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1 Tree
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| Bai |
Phylogeographic breaks within Asian butternuts indicate the existence of a phytogeographic divide in East Asia. |
New Phytol |
2016 |
26499508
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1 Tree
|
| Marshall |
Inflation of Molecular Clock Rates and Dates: Molecular Phylogenetics, Biogeography, and Diversification of a Global Cicada Radiation from Australasia (Hemiptera: Cicadidae: Cicadettini). |
Syst Biol |
2016 |
26493828
|
1 Tree
|
| Brown |
Phylogeny of the island archipelago frog genus Sanguirana: Another endemic Philippine radiation that diversified 'Out-of-Palawan'. |
Mol Phylogenet Evol |
2016 |
26477738
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1 Tree
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| McTaggart |
Host jumps shaped the diversity of extant rust fungi (Pucciniales). |
New Phytol |
2016 |
26459939
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1 Tree
|
| Li |
Revisiting the evolutionary events in Allium subgenus Cyathophora (Amaryllidaceae): Insights into the effect of the Hengduan Mountains Region (HMR) uplift and Quaternary climatic fluctuations to the environmental changes in the Qinghai-Tibet Plateau. |
Mol Phylogenet Evol |
2016 |
26458759
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1 Tree
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| Dufort |
An augmented supermatrix phylogeny of the avian family Picidae reveals uncertainty deep in the family tree. |
Mol Phylogenet Evol |
2016 |
26416706
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1 Tree
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| Shen |
Enlarged Multilocus Data set Provides Surprisingly Younger Time of Origin for the Plethodontidae, the Largest Family of Salamanders. |
Syst Biol |
2016 |
26385618
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1 Tree
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| Ma |
Phylogeny and dating of divergences within the genus Thymallus (Salmonidae: Thymallinae) using complete mitochondrial genomes. |
Mitochondrial DNA A DNA MappSeq Anal |
2016 |
26329113
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1 Tree
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| Rodriguez |
Molecular phylogeny of Pompilinae (Hymenoptera: Pompilidae): Evidence for rapid diversification and host shifts in spider wasps. |
Mol Phylogenet Evol |
2016 |
26302949
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1 Tree
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| Davis |
Herbivory Promotes Dental Disparification and Macroevolutionary Dynamics in Grunters (Teleostei: Terapontidae), a Freshwater Adaptive Radiation. |
Am Nat |
2016 |
26913945
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1 Tree
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| Gómez |
Up high and down low: Molecular systematics and insight into the diversification of the ground beetle genus Rhadine LeConte. |
Mol Phylogenet Evol |
2016 |
26879711
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1 Tree
|
| Tariel |
Tempo and mode of speciation in Holacanthus angelfishes based on RADseq markers. |
Mol Phylogenet Evol |
2016 |
26876637
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1 Tree
|
| Brahimi |
Genetic and morphological consequences of Quaternary glaciations: A relic barbel lineage (Luciobarbus pallaryi, Cyprinidae) of Guir Basin (Algeria). |
C R Biol |
2016 |
26874458
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1 Tree
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| Silva |
Transcontinental dispersal, ecological opportunity and origins of an adaptive radiation in the Neotropical catfish genus Hypostomus (Siluriformes: Loricariidae). |
Mol Ecol |
2016 |
26863936
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1 Tree
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| Martin |
Diabolical survival in Death Valley: recent pupfish colonization, gene flow and genetic assimilation in the smallest species range on earth. |
Proc Biol Sci |
2016 |
26817777
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1 Tree
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| Mitchell |
How the temperate world was colonised by bindweeds: biogeography of the Convolvuleae (Convolvulaceae). |
BMC Evol Biol |
2016 |
26787507
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1 Tree
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| Norman |
Ecological opportunity and the evolution of habitat preferences in an arid-zone bird: implications for speciation in a climate-modified landscape. |
Sci Rep |
2016 |
26787111
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1 Tree
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| Tsuji |
Colorful patterns indicate common ancestry in diverged tiger beetle taxa: Molecular phylogeny, biogeography, and evolution of elytral coloration of the genus Cicindela subgenus Sophiodela and its allies. |
Mol Phylogenet Evol |
2016 |
26578441
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1 Tree
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| Paun |
Processes Driving the Adaptive Radiation of a Tropical Tree (Diospyros, Ebenaceae) in New Caledonia, a Biodiversity Hotspot. |
Syst Biol |
2016 |
26430059
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1 Tree
|
| Toussaint |
Unveiling the diversification dynamics of Australasian predaceous diving beetles in the Cenozoic. |
Syst Biol |
2015 |
25173563
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1 Tree
|
| Claramunt |
A new time tree reveals Earth history's imprint on the evolution of modern birds. |
Sci Adv |
2015 |
26824065
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1 Tree
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Mitochondrial phylogeography and cryptic divergence in the stickleback genus Pungitius |
Journal of Biogeography |
2015 |
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Molecular phylogenetics of the glass frog Hyalinobatrachium orientale (Anura: Centrolenidae): evidence for Pliocene connections between mainland Venezuela and the island of Tobago. |
Mitochondrial DNA |
2015 |
24491102
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1 Tree
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| Magnacca |
Rapid adaptive radiation and host plant conservation in the Hawaiian picture wing Drosophila (Diptera: Drosophilidae). |
Mol Phylogenet Evol |
2015 |
26151218
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1 Tree
|
| Marki |
Breeding system evolution influenced the geographic expansion and diversification of the core Corvoidea (Aves: Passeriformes). |
Evolution |
2015 |
26095612
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1 Tree
|
| Mammola |
Alpine endemic spiders shed light on the origin and evolution of subterranean species. |
PeerJ |
2015 |
26734503
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2 Trees
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| Genner |
Geographical ancestry of Lake Malawi's cichlid fish diversity. |
Biol Lett |
2015 |
26063752
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1 Tree
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| Pirie |
Back to Gondwanaland: can ancient vicariance explain (some) Indian Ocean disjunct plant distributions? |
Biol Lett |
2015 |
26063747
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1 Tree
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| Peng |
Phylogeny of Asian Bufonids inferred from mitochondrial DNA sequences (Anura: Amphibia): implication for the speciation of East Asian Bufonids. |
Mitochondrial DNA |
2015 |
26713566
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1 Tree
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| Álvarez-Varas |
Comparative phylogeography of co-distributed Phrygilus species (Aves, Thraupidae) from the Central Andes. |
Mol Phylogenet Evol |
2015 |
25987531
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1 Tree
|
| Van der Nest |
Saprophytic and pathogenic fungi in the Ceratocystidaceae differ in their ability to metabolize plant-derived sucrose. |
BMC Evol Biol |
2015 |
26643441
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1 Tree
|
| Wang |
Full-length Numt analysis provides evidence for hybridization between the Asian colobine genera Trachypithecus and Semnopithecus. |
Am J Primatol |
2015 |
25903086
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1 Tree
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| Grace |
Evolutionary history and leaf succulence as explanations for medicinal use in aloes and the global popularity of Aloe vera. |
BMC Evol Biol |
2015 |
25879886
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1 Tree
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| Blaimer |
Phylogenomic methods outperform traditional multi-locus approaches in resolving deep evolutionary history: a case study of formicine ants. |
BMC Evol Biol |
2015 |
26637372
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1 Tree
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| Wu |
The Complete Chloroplast Genome of Guadua angustifolia and Comparative Analyses of Neotropical-Paleotropical Bamboos. |
PLoS One |
2015 |
26630488
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1 Tree
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| Frazão |
The Gondwana Breakup and the History of the Atlantic and Indian Oceans Unveils Two New Clades for Early Neobatrachian Diversification. |
PLoS One |
2015 |
26618546
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1 Tree
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| Shao |
Genetic adaptations of the plateau zokor in high-elevation burrows. |
Sci Rep |
2015 |
26602147
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1 Tree
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| Zhu |
Phylogeny of Rosa sections Chinenses and Synstylae (Rosaceae) based on chloroplast and nuclear markers. |
Mol Phylogenet Evol |
2015 |
25812912
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1 Tree
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| Driller |
Stop and Go - Waves of Tarsier Dispersal Mirror the Genesis of Sulawesi Island. |
PLoS One |
2015 |
26559527
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1 Tree
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| Daniels |
Multilocus Phylogeny of the Afrotropical Freshwater Crab Fauna Reveals Historical Drainage Connectivity and Transoceanic Dispersal Since the Eocene. |
Syst Biol |
2015 |
25649930
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1 Tree
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| Fernández |
Unnoticed in the tropics: phylogenomic resolution of the poorly known arachnid order Ricinulei (Arachnida). |
R Soc Open Sci |
2015 |
26543583
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1 Tree
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| Uribe-Convers |
Shifts in diversification rates linked to biogeographic movement into new areas: An example of a recent radiation in the Andes. |
Am J Bot |
2015 |
26542843
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1 Tree
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| Mokodongan |
Mitochondrial and nuclear phylogenetic trees and divergence time estimations of Sulawesi endemic Adrianichthyidae. |
Data Brief |
2015 |
26543892
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1 Tree
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| Heinrichs |
Molecular and Morphological Evidence Challenges the Records of the Extant Liverwort Ptilidium pulcherrimum in Eocene Baltic Amber. |
PLoS One |
2015 |
26536603
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1 Tree
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| Sánchez-Ramírez |
In and out of refugia: historical patterns of diversity and demography in the North American Caesar's mushroom species complex. |
Mol Ecol |
2015 |
26465233
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2 Trees
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| Zou |
Multiple origins of BBCC allopolyploid species in the rice genus (Oryza). |
Sci Rep |
2015 |
26460928
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1 Tree
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| Ma |
Biogeographic history and high-elevation adaptations inferred from the mitochondrial genome of Glyptosternoid fishes (Sisoridae, Siluriformes) from the southeastern Tibetan Plateau. |
BMC Evol Biol |
2015 |
26511921
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1 Tree
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| Müller |
Intercontinental long-distance dispersal of Canellaceae from the New to the Old World revealed by a nuclear single copy gene and chloroplast loci. |
Mol Phylogenet Evol |
2015 |
25579657
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1 Tree
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| Igea |
Multilocus species trees and species delimitation in a temporal context: application to the water shrews of the genus Neomys. |
BMC Evol Biol |
2015 |
26416383
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2 Trees
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| Padhi |
A testis-specific gene within a widely expressed gene: Contrasting evolutionary patterns of two differentially expressed mammalian proteins encoded by a single gene, CAMK4. |
Anim Genet |
2015 |
26388303
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1 Tree
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| Wu |
Phylogeny and Historical Biogeography of Asian Pterourus Butterflies (Lepidoptera: Papilionidae): A Case of Intercontinental Dispersal from North America to East Asia. |
PLoS One |
2015 |
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Molecular phylogeny of Squaliformes and first occurrence of bioluminescence in sharks. |
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On the origin of the Norwegian lemming. |
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Sequencing of chloroplast genomes from wheat, barley, rye and their relatives provides a detailed insight into the evolution of the Triticeae tribe. |
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Molecular phylogeny of Myriapoda provides insights into evolutionary patterns of the mode in post-embryonic development. |
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Evolutionary history of true crabs (Crustacea: Decapoda: Brachyura) and the origin of freshwater crabs. |
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Phylogenetic and molecular dating analysis of Taiwan Blue Pheasant (Lophura swinhoii). |
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Molecular phylogeny of the spider family Sparassidae with focus on the genus Eusparassus and notes on the RTA-clade and 'Laterigradae'. |
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Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria. |
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Phylogenetic position and evolutionary history of the turtle and whale barnacles (Cirripedia: Balanomorpha: Coronuloidea). |
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New insights into the intricate taxonomy and phylogeny of the Sylvia curruca complex. |
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Combining geometric morphometrics, molecular phylogeny, and micropaleontology to assess evolutionary patterns in Mallomonas (Synurophyceae: Heterokontophyta). |
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Phylogenetic inference of nuptial trait evolution in the context of asymmetrical introgression in North American darters (teleostei). |
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Bees diversified in the age of eudicots. |
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Diversification of rhacophorid frogs provides evidence for accelerated faunal exchange between India and Eurasia during the Oligocene. |
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Comparative phyloclimatic analysis and evolution of ecological niches in the scimitar babblers (Aves: Timaliidae: Pomatorhinus). |
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PLoS One |
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Mitochondrial phylogenomics of modern and ancient equids. |
PLoS One |
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Post-Boreotropical dispersals explain the pantropical disjunction in Paederia (Rubiaceae). |
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A molecular phylogeny of Asian barbets: speciation and extinction in the tropics. |
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New insights in the long-debated evolutionary history of Triuridaceae (Pandanales). |
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Dating the diversification of the major lineages of Ascomycota (Fungi). |
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Molecular phylogenetics of the mud and musk turtle family Kinosternidae. |
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A multi-locus molecular timescale for the origin and diversification of eels (Order: Anguilliformes). |
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Biogeography and spatio-temporal diversification of Selenidera and Andigena toucans (Aves: Ramphastidae). |
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Phylogeography of Poorly Dispersing Net-Winged Beetles: A Role of Drifting India in the Origin of Afrotropical and Oriental Fauna. |
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Convergent evolution of morphology and habitat use in the explosive Hawaiian fancy case caterpillar radiation. |
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Integrated fossil and molecular data reveal the biogeographic diversification of the eastern Asian-eastern North American disjunct hickory genus (Carya Nutt.). |
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The linking of plate tectonics and evolutionary divergence. |
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Phylogenetic relationships of the enigmatic longtailed rattlesnakes (Crotalus ericsmithi, C. lannomi, and C. stejnegeri). |
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Molecular phylogeny and biogeography of Petaurista inferred from the cytochrome b gene, with implications for the taxonomic status of P. caniceps, P. marica and P. sybilla. |
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Ecological opportunity and incumbency in the diversification of repeated continental colonizations by muroid rodents. |
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A multi-calibrated mitochondrial phylogeny of extant Bovidae (Artiodactyla, Ruminantia) and the importance of the fossil record to systematics. |
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Genome duplication and multiple evolutionary origins of complex migratory behavior in Salmonidae. |
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A total evidence approach to understanding phylogenetic relationships and ecological diversity in Selaginella subg. Tetragonostachys. |
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Complete mitogenome of Asiatic lion resolves phylogenetic status within Panthera. |
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Molecular phylogeny of the Notostraca. |
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Historical biogeography of Eastern Asian-Eastern North American disjunct Melaphidina aphids (Hemiptera: Aphididae: Eriosomatinae) on Rhus hosts (Anacardiaceae). |
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Molecular phylogeny of Threskiornithidae (Aves: Pelecaniformes) based on nuclear and mitochondrial DNA. |
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Molecular phylogenetic reconstructions identify East Asia as the cradle for the evolution of the cosmopolitan genus Myotis (Mammalia, Chiroptera). |
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Evolutionary history of Triticum petropavlovskyi Udacz. et Migusch. inferred from the sequences of the 3-phosphoglycerate kinase gene. |
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Molecular phylogeny of Koenigia L. (Polygonaceae: Persicarieae): implications for classification, character evolution and biogeography. |
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Phylogeny of the Oenanthe lugens complex (Aves, Muscicapidae: Saxicolinae): paraphyly of a morphologically cohesive group within a recent radiation of open-habitat chats. |
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Ancient lineage, young troglobites: recent colonization of caves by Nesticella spiders. |
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Combining fossil and molecular data to date the diversification of New World Primates. |
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Niche evolution through time and across continents: The story of Neotropical Cedrela (Meliaceae). |
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Evolutionary origin of the Scombridae (tunas and mackerels): members of a paleogene adaptive radiation with 14 other pelagic fish families. |
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Malarial parasite diversity in chimpanzees: the value of comparative approaches to ascertain the evolution of Plasmodium falciparum antigens. |
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Adaptive radiation of chemosymbiotic deep-sea mussels. |
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Molecular and fossil evidence place the origin of cichlid fishes long after Gondwanan rifting. |
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Afrobatrachian mitochondrial genomes: genome reorganization, gene rearrangement mechanisms, and evolutionary trends of duplicated and rearranged genes. |
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Molecular phylogeny and biogeography of the Hawaiian craneflies Dicranomyia (Diptera: Limoniidae). |
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Explosive radiation in high Andean Hypericum-rates of diversification among New World lineages. |
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Integration of molecules and new fossils supports a Triassic origin for Lepidosauria (lizards, snakes, and tuatara). |
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Complete mitochondrial genomes reveal phylogeny relationship and evolutionary history of the family Felidae. |
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Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus. |
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Host sex-specific parasites in a functionally dioecious fig: a preference way of adaptation to their hosts. |
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Are characiform fishes Gondwanan in origin? Insights from a time-scaled molecular phylogeny of the Citharinoidei (Ostariophysi: Characiformes). |
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A mitochondrial phylogeny and biogeographical scenario for Asiatic water shrews of the genus Chimarrogale: implications for taxonomy and low-latitude migration routes. |
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Evolutionary history of the Afro-Madagascan Ixora species (Rubiaceae): species diversification and distribution of key morphological traits inferred from dated molecular phylogenetic trees. |
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Phylogenetic position and subspecies divergence of the endangered New Zealand Dotterel (Charadrius obscurus). |
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A molecular phylogeny of Alpine subterranean Trechini (Coleoptera: Carabidae). |
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Rapid radiation of Rheum (Polygonaceae) and parallel evolution of morphological traits. |
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2012 |
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Evolution of the intercontinental disjunctions in six continents in the Ampelopsis clade of the grape family (Vitaceae). |
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The complete mitochondrial genome sequences of Chelodina rugosa and Chelus fimbriata (Pleurodira: Chelidae): implications of a common absence of initiation sites (O(L)) in pleurodiran turtles. |
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Molecular Phylogeny and Estimated Time of Divergence in the Central European Melanopsidae: Melanopsis, Fagotia and Holandriana (Mollusca: Gastropoda: Cerithioidea) |
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Explosive speciation of Takifugu: another use of fugu as a model system for evolutionary biology. |
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Molecular phylogeny and biogeography of the Cuban genus Girardinus Poey, 1854 and relationships within the tribe Girardinini (Actinopterygii, Poeciliidae). |
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Molecular phylogeny of reed beetles (Col., Chrysomelidae, Donaciinae): the signature of ecological specialization and geographical isolation. |
Mol Phylogenet Evol |
2008 |
18672382
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1 Tree
|
| Smith |
Distinguishing coevolution from covicariance in an obligate pollination mutualism: asynchronous divergence in Joshua tree and its pollinators. |
Evolution |
2008 |
18752609
|
1 Tree
|
| Frey |
Molecular phylogenies and historical biogeography of a circumtropical group of gastropods (Genus: Nerita): implications for regional diversity patterns in the marine tropics. |
Mol Phylogenet Evol |
2008 |
18586528
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1 Tree
|
| Gussarova |
Molecular phylogeny and biogeography of the bipolar Euphrasia (Orobanchaceae): recent radiations in an old genus. |
Mol Phylogenet Evol |
2008 |
18555702
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1 Tree
|
| Shoo |
Diversification patterns of pebble-mimic dragons are consistent with historical disruption of important habitat corridors in arid Australia. |
Mol Phylogenet Evol |
2008 |
18539052
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1 Tree
|
| Alam |
Genetic divergence and evolutionary relationships in six species of genera Hoplobatrachus and Euphlyctis (Amphibia: Anura) from Bangladesh and other Asian countries revealed by mitochondrial gene sequences. |
Mol Phylogenet Evol |
2008 |
18513995
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1 Tree
|
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Bayesian estimation of post-Messinian divergence times in Balearic Island lizards. |
Mol Phylogenet Evol |
2008 |
18501640
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1 Tree
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| Patou |
Phylogenetic relationships of the Asian palm civets (Hemigalinae & Paradoxurinae, Viverridae, Carnivora). |
Mol Phylogenet Evol |
2008 |
18434210
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1 Tree
|
| Redondo |
Molecular systematics of the genus Artibeus (Chiroptera: Phyllostomidae). |
Mol Phylogenet Evol |
2008 |
18662791
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1 Tree
|
| Naro-Maciel |
Evolutionary relationships of marine turtles: A molecular phylogeny based on nuclear and mitochondrial genes. |
Mol Phylogenet Evol |
2008 |
18760371
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1 Tree
|
| Binford |
Phylogenetic relationships of Loxosceles and Sicarius spiders are consistent with Western Gondwanan vicariance. |
Mol Phylogenet Evol |
2008 |
18755282
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1 Tree
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| Tinn |
Erratic rates of molecular evolution and incongruence of fossil and molecular divergence time estimates in Ostracoda (Crustacea). |
Mol Phylogenet Evol |
2008 |
18482852
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1 Tree
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| McKenzie |
Radiation of southern African daisies: biogeographic inferences for subtribe Arctotidinae (Asteraceae, Arctotideae). |
Mol Phylogenet Evol |
2008 |
18675920
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1 Tree
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| Robins |
Dating of divergences within the Rattus genus phylogeny using whole mitochondrial genomes. |
Mol Phylogenet Evol |
2008 |
18725306
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1 Tree
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| Rodríguez-Serrano |
The evolution of ecomorphological traits within the Abrothrichini (Rodentia: Sigmodontinae): a Bayesian phylogenetics approach. |
Mol Phylogenet Evol |
2008 |
18571938
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1 Tree
|
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Molecular phylogeny of three Mesalina (Reptilia: Lacertidae) species (M. guttulata, M. brevirostris and M. bahaeldini) from North Africa and the Middle East: another case of paraphyly? |
Mol Phylogenet Evol |
2008 |
18644456
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The genus Coleodactylus (Sphaerodactylinae, Gekkota) revisited: a molecular phylogenetic perspective. |
Mol Phylogenet Evol |
2008 |
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Diversification in the northern neotropics: mitochondrial and nuclear DNA phylogeography of the iguana Ctenosaura pectinata and related species. |
Mol Ecol |
2008 |
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1 Tree
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| Illera |
Phylogenetic relationships, biogeography and speciation in the avian genus Saxicola. |
Mol Phylogenet Evol |
2008 |
18571939
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1 Tree
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Phylogenetic relationships of two Salamandrella species as revealed by mitochondrial DNA and allozyme variation (Amphibia: Caudata: Hynobiidae). |
Mol Phylogenet Evol |
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Hidden generic diversity in Neotropical birds: molecular and anatomical data support a new genus for the "Scytalopus"indigoticus species-group (Aves: Rhinocryptidae). |
Mol Phylogenet Evol |
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18644455
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Phylogenetic relationships and the evolution of regulatory gene sequences in the parrotfishes. |
Mol Phylogenet Evol |
2008 |
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Molecular systematics, phylogeny and biogeography of roaches (Rutilus, Teleostei, Cyprinidae). |
Mol Phylogenet Evol |
2008 |
18692146
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1 Tree
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Phylogeny and biogeography of the family Salamandridae (Amphibia: Caudata) inferred from complete mitochondrial genomes. |
Mol Phylogenet Evol |
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Colonization and diversification of the spider genus Pholcus Walckenaer, 1805 (Araneae, Pholcidae) in the Macaronesian archipelagos: evidence for long-term occupancy yet rapid recent speciation. |
Mol Phylogenet Evol |
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Phylogenetic relationships and biogeography of the Japanese clawed salamander, Onychodactylus japonicus (Amphibia: Caudata: Hynobiidae), and its congener inferred from the mitochondrial cytochrome b gene. |
Mol Phylogenet Evol |
2008 |
18713651
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Molecular and Morphometrical Revision of the Zaprionus tuberculatus Species Subgroup (Diptera: Drosophilidae)+ with Descriptions of Two Cryptic Species |
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Phylogeny+ biogeography+ and rates of diversification of New World Astragalus (Leguminosae) with an emphasis on South American radiations |
American Journal of Botany |
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Phylogenetics of neotropical Platymiscium (Leguminosae: Dalbergieae): systematics+ divergence times+ and biogeography inferred from nuclear ribosomal and plastid DNA sequence data |
American Journal of Botany |
2008 |
21632332
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Molecular phylogenetics and biogeography of the Caribbean-centered Croton subgenus Moacroton (Euphorbiaceae s.s.) |
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Phylogenetic patterns and diversification in the caesalpinioid legumes |
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New expansions in old clades: population genetics and phylogeny of Gnatholepis species (Teleostei : Gobioidei) in the Pacific |
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Origin and evolution of the northern hemisphere disjunction in the moss genus Homalothecium (Brachytheciaceae) |
American Journal of Botany |
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Molecular phylogeny and diversification history of Prosopis (Fabaceae : Mimosoideae) |
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Molecular phylogeny and historical biogeography of the Holarctic wetland leaf beetle of the genus Plateumaris. |
Mol Phylogenet Evol |
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The relative importance of body size and paleoclimatic change as explanatory variables influencing lineage diversification rate: an evolutionary analysis of bullhead catfishes (Siluriformes: Ictaluridae). |
Syst Biol |
2008 |
18288621
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A dated phylogeny of the palm tribe Chamaedoreeae supports Eocene dispersal between Africa, North and South America. |
Mol Phylogenet Evol |
2008 |
18357644
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| Slechtová |
Molecular phylogeny of the freshwater fish family Cobitidae (Cypriniformes: Teleostei): delimitation of genera, mitochondrial introgression and evolution of sexual dimorphism. |
Mol Phylogenet Evol |
2008 |
18255319
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1 Tree
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| Musilová |
Molecular phylogeny and biogeography of the Neotropical cichlid fish tribe Cichlasomatini (Teleostei: Cichlidae: Cichlasomatinae). |
Mol Phylogenet Evol |
2008 |
18055225
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1 Tree
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Explosive avian radiations and multi-directional dispersal across Wallacea: evidence from the Campephagidae and other Crown Corvida (Aves). |
Mol Phylogenet Evol |
2008 |
18295511
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1 Tree
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| Williams |
Did tectonic activity stimulate oligo-miocene speciation in the Indo-West Pacific? |
Evolution |
2008 |
18410535
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3 Trees
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| Wirta |
An old adaptive radiation of forest dung beetles in Madagascar. |
Mol Phylogenet Evol |
2008 |
18424187
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1 Tree
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| Dornburg |
The influence of model averaging on clade posteriors: an example using the triggerfishes (Family Balistidae). |
Syst Biol |
2008 |
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Evolution of the SEC1 gene in New World monkey lineages (Primates, Platyrrhini). |
Genet Mol Res |
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Phylogenetic analysis informed by geological history supports multiple, sequential invasions of the Mediterranean Basin by the angiosperm family Araceae. |
Syst Biol |
2008 |
18425714
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Reticulate evolution in Thuja inferred from multiple gene sequences: implications for the study of biogeographical disjunction between eastern Asia and North America. |
Mol Phylogenet Evol |
2008 |
18346917
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The first mistletoes: origins of aerial parasitism in Santalales. |
Mol Phylogenet Evol |
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18378469
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| Schaefer |
A phylogeny of the oil bee tribe Ctenoplectrini (Hymenoptera: Anthophila) based on mitochondrial and nuclear data: evidence for early Eocene divergence and repeated out-of-Africa dispersal. |
Mol Phylogenet Evol |
2008 |
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A timescale and phylogeny for "bandicoots" (Peramelemorphia: Marsupialia) based on sequences for five nuclear genes. |
Mol Phylogenet Evol |
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18328736
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Patterns of colonization, evolution and gene flow in species of the genus Patella in the Macaronesian Islands. |
Mol Ecol |
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18179442
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Mitochondrial phylogeny, taxonomy and biogeography of the silvered langur species group (Trachypithecus cristatus). |
Mol Phylogenet Evol |
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Phylogeny of the beaked whale genus Mesoplodon (Ziphiidae: Cetacea) revealed by nuclear introns: implications for the evolution of male tusks. |
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Pliocene colonization and adaptive radiations in Australia and New Guinea (Sahul): multilocus systematics of the old endemic rodents (Muroidea: Murinae). |
Mol Phylogenet Evol |
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A 15-Myr-old genetic bottleneck. |
Mol Biol Evol |
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DNA evidence for a Paleocene origin of the Alcidae (Aves: Charadriiformes) in the Pacific and multiple dispersals across northern oceans. |
Mol Phylogenet Evol |
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Phylogeny, biogeography and taxonomy of the African wattle-eyes (Aves: Passeriformes: Platysteiridae). |
Mol Phylogenet Evol |
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Radiation, multiple dispersal and parallelism in the skinks, Chalcides and Sphenops (Squamata: Scincidae), with comments on Scincus and Scincopus and the age of the Sahara Desert. |
Mol Phylogenet Evol |
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Historical biogeography, divergence times, and diversification patterns of bumble bees (Hymenoptera: Apidae: Bombus). |
Syst Biol |
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18275002
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Dated historical biogeography of the temperate Loliinae (Poaceae, Pooideae) grasses in the northern and southern hemispheres. |
Mol Phylogenet Evol |
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Divergence dates of libelluloid dragonflies (Odonata: Anisoptera) estimated from rRNA using paired-site substitution models. |
Mol Phylogenet Evol |
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Multilocus phylogenetics of a rapid radiation in the genus Thomomys (Rodentia: Geomyidae). |
Syst Biol |
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An effect of 16S rRNA intercistronic variability on coevolutionary analysis in symbiotic bacteria: molecular phylogeny of Arsenophonus triatominarum. |
Syst Appl Microbiol |
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Molecular data do not support a southern hemisphere base of Nothofagus powdery mildews. |
Mycologia |
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Rooting and dating maples (Acer) with an uncorrelated-rates molecular clock: implications for north American/Asian disjunctions. |
Syst Biol |
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Under the volcano: phylogeography and evolution of the cave-dwelling Palmorchestia hypogaea (Amphipoda, Crustacea) at La Palma (Canary Islands). |
BMC Biol |
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Multigene phylogeny of the Mustelidae: resolving relationships, tempo and biogeographic history of a mammalian adaptive radiation |
BMC Biol |
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Molecular phylogenetics of large-bodied tamarins\, Saguinus spp. (Primates\, Platyrrhini) |
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Molecular phylogeny and divergence times of ancient South American and Malagasy river turtles (Testudines: Pleurodira: Podocnemididae) |
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Iridaceae 'out of Australasia'? Phylogeny, biogeography, and divergence time based on plastid DNA sequences |
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Bioinformatics analysis of lactoferrin gene for several species. |
Biochem Genet |
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Phylogenetic position of Porthidium hespere (Viperidae : Crotalinae) and phylogeography of arid-adapted hognosed pitvipers based on mitochondrial DNA |
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Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary. |
BMC Evol Biol |
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Correlating Bayesian date estimates with climatic events and domestication using a bovine case study. |
Biol Lett |
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Tertiary climate change and the diversification of the Amazonian gecko genus Gonatodes (Sphaerodactylidae, Squamata). |
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Major evolutionary transitions in ant agriculture. |
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Rates of molecular evolution are linked to life history in flowering plants. |
Science |
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Major Caribbean and Central American frog faunas originated by ancient oceanic dispersal. |
Proc Natl Acad Sci U S A |
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Correlates of diversification in the plant clade Dipsacales: geographic movement and evolutionary innovations. |
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A comprehensive phylogeny of beetles reveals the evolutionary origins of a superradiation. |
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Global patterns of diversification in the history of modern amphibians. |
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Using genomic data to unravel the root of the placental mammal phylogeny. |
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Fossils and phylogenies: integrating multiple lines of evidence to investigate the origin of early major metazoan lineages |
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The delayed rise of present-day mammals. |
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Phylogeny of "core Gruiformes" (Aves: Grues) and resolution of the Limpkin-Sungrebe problem. |
Mol Phylogenet Evol |
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A family matter: conclusive resolution of the taxonomic position of the long-fingered bats, miniopterus. |
Mol Biol Evol |
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A new time-scale for ray-finned fish evolution. |
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Calibration choice, rate smoothing, and the pattern of tetrapod diversification according to the long nuclear gene RAG-1. |
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Extended mitogenomic phylogenetic analyses yield new insight into crocodylian evolution and their survival of the Cretaceous-Tertiary boundary. |
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Global patterns of diversification and species richness in amphibians. |
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A phylogenetic hot spot for evolutionary novelty in Middle American treefrogs. |
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Mitochondrial phylogeography of Rana (Pelophylax) populations in the Eastern Mediterranean region. |
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Molecular and genomic data identify the closest living relative of primates. |
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Amassing diversity in an ancient lake: evolution of a morphologically diverse parthenogenetic gastropod assemblage in Lake Malawi. |
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Synteny and chromosome evolution in the lepidoptera: evidence from mapping in Heliconius melpomene. |
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Molecular phylogeny and biogeography of West Indian frogs of the genus Leptodactylus (Anura, Leptodactylidae). |
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Evolution and biogeography of Lyallia and Hectorella (Portulacaceae)+ geographically isolated sisters from the Southern Hemisphere |
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Molecular phylogenetic dating supports an ancient endemic speciation model in Australia's biodiversity hotspot. |
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Phylogeny of the Geometridae and the evolution of winter moths inferred from a simultaneous analysis of mitochondrial and nuclear genes. |
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Diversification of Asclepiadoideae (Apocynaceae) in the New World |
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Phylogeny and biogeography of the sandalwoods (Santalum+ Santalaceace): Repeated dispersals throughout the Pacific |
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Evolutionary history of Stratiomyidae (Insecta: Diptera): the molecular phylogeny of a diverse family of flies. |
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Evolution of leafy liverworts (Jungermanniidae, Marchantiophyta): estimating divergence times from chloroplast DNA sequences using penalized likelihood with integrated fossil evidence |
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A new endemic family of New Zealand passerine birds: adding heat to a biodiversity hotspot |
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Recent oceanic long-distance dispersal and divergence in the amphi-Atlantic rain forest genus Renealmia L.f. (Zingiberaceae). |
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Phylogeny and biogeography of 91 species of heroine cichlids (Teleostei: Cichlidae) based on sequences of the cytochrome b gene. |
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Calibration of a molecular clock in tits (Paridae)--do nucleotide substitution rates of mitochondrial genes deviate from the 2% rule? |
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Nuclear gene sequences resolve species phylogeny and mitochondrial introgression in Leptocarabus beetles showing trans-species polymorphisms. |
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Genetic elucidation of cryptic and ancient diversity in a group of Australian diplodactyline geckos: the Diplodactylus vittatus complex. |
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Evolutionary history of Lake Tanganyika's scale-eating cichlid fishes. |
Mol Phylogenet Evol |
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The relationships and origins of the New Zealand wattlebirds (Passeriformes, Callaeatidae) from DNA sequence analyses. |
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Exceptional among-lineage variation in diversification rates during the radiation of Australia's most diverse vertebrate clade. |
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Phylogeography of the piranha genera Serrasalmus and Pygocentrus: implications for the diversification of the Neotropical ichthyofauna. |
Mol Ecol |
2007 |
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Molecular phylogeny and dating of an insular endemic moth radiation inferred from mitochondrial and nuclear genes: the genus Galagete (Lepidoptera: Autostichidae) of the Galapagos Islands. |
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A phylogenetic and biogeographic perspective on the evolution of poeciliid fishes. |
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Geological and climatic forces driving speciation in the continentally distributed trilling chorus frogs (Pseudacris). |
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Molecular phylogenetics of the butterflyfishes (Chaetodontidae): taxonomy and biogeography of a global coral reef fish family. |
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Utility of the nuclear protein-coding gene, elongation factor-1 gamma (EF-1gamma), for spider systematics, emphasizing family level relationships of tarantulas and their kin (Araneae: Mygalomorphae). |
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Pair of lice lost or parasites regained: the evolutionary history of anthropoid primate lice. |
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Phylogeny and divergence of the pinnipeds (Carnivora: Mammalia) assessed using a multigene dataset. |
BMC Evol Biol |
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Adaptive radiation of shrubby tarweeds (Deinandra) in the California Islands parallels diversification of the Hawaiian silversword alliance (Compositae - Madiinae) |
American Journal of Botany |
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Lineage divergence of a freshwater snail clade associated with post-Tethys marine basin development. |
Mol Phylogenet Evol |
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Evolution and diversification of the forest and hypogean ground-beetle genus Trechus in the Canary Islands. |
Mol Phylogenet Evol |
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Phylogenomic data analyses provide evidence that Xenarthra and Afrotheria are sister groups. |
Mol Biol Evol |
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Infrequent and unidirectional colonization of hyperdiverse Papuadytes diving beetles in New Caledonia and New Guinea. |
Mol Phylogenet Evol |
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1 Tree
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Molecules, morphometrics and new fossils provide an integrated view of the evolutionary history of Rhinopomatidae (Mammalia: Chiroptera). |
BMC Evol Biol |
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1 Tree
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Comparative historical biogeography of Plateumaris leaf beetles (Coleoptera: Chrysomelidae) in Japan: interplay between fossil and molecular data |
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A molecular phylogeny of Dorylus army ants provides evidence for multiple evolutionary transitions in foraging niche. |
BMC Evol Biol |
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On the time scale of New World primate diversification. |
Am J Phys Anthropol |
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Mid-Tertiary dispersal, not Gondwanan vicariance explains distribution patterns in the wax palm subfamily (Ceroxyloideae: Arecaceae). |
Mol Phylogenet Evol |
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Nuclear DNA does not reconcile 'rocks' and 'clocks' in Neoaves: a comment on Ericson et al. |
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Phylogeny and Bayesian divergence time estimations of small-headed flies (Diptera: Acroceridae) using multiple molecular markers. |
Mol Phylogenet Evol |
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Hybrid origin of the Pliocene ancestor of wild goats. |
Mol Phylogenet Evol |
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Phylogeography of the lacertid lizard+ Psammodromus algirus+ in Iberia and across the Strait of Gibraltar |
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Molecular phylogenetics of gadidae and related gadiformes based on mitochondrial DNA sequences. |
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Molecular phylogeny and dating reveals an Oligo-Miocene radiation of dry-adapted shrubs (former Tremandraceae) from rainforest tree progenitors (Elaeocarpaceae) in Australia |
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Mitochondrial DNA phylogeography of Lissotriton boscai (Caudata, Salamandridae): evidence for old, multiple refugia in an Iberian endemic. |
Mol Ecol |
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Evolution of Mesobuthus gibbosus (Brullé, 1832) (Scorpiones: Buthidae) in the northeastern Mediterranean region. |
Mol Ecol |
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Variation in mitochondrial COII gene sequences among two species of Japanese knotweed-boring moths, Ostrinia latipennis and O. ovalipennis (Lepidoptera: Crambidae). |
Bull Entomol Res |
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Molecular phylogenetic analysis of Petunia Juss. (Solanaceae). |
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Phylogeography of the genus Cardiandra based on genetic variation in cpDNA sequences. |
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Dating dispersal and radiation in the gymnosperm Gnetum (Gnetales)--clock calibration when outgroup relationships are uncertain. |
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Tempo and mode of spliceosomal intron evolution in actin of foraminifera. |
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The mitochondrial genome of spotted green pufferfish Tetraodon nigroviridis (Teleostei: Tetraodontiformes) and divergence time estimation among model organisms in fishes. |
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Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds. |
Mol Biol Evol |
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Evolutionary rates, divergence dates, and the performance of mitochondrial genes in Bayesian phylogenetic analysis. |
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Biogeographic patterns and phylogeography of dwarf chameleons (Bradypodion) in an African biodiversity hotspot. |
Mol Ecol |
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Radiation and diversification within the Ligularia-Cremanthodium-Parasenecio complex (Asteraceae) triggered by uplift of the Qinghai-Tibetan Plateau. |
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A morphologically ill-founded powdery mildew species, Pleochaeta indica, is recognized as a phylogenetic species based on the analysis of the nuclear ribosomal DNA sequences. |
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Multiple intercontinental dispersals shaped the distribution area of Hordeum (Poaceae). |
New Phytol |
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Phylogenetic systematics and tempo of evolution of the Viverrinae (Mammalia, Carnivora, Viverridae) within feliformians: implications for faunal exchanges between Asia and Africa. |
Mol Phylogenet Evol |
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9 Trees
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Phylogeny and biogeography of Altingiaceae: evidence from combined analysis of five non-coding chloroplast regions. |
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A mitogenomic timescale for birds detects variable phylogenetic rates of molecular evolution and refutes the standard molecular clock. |
Mol Biol Evol |
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19 Trees
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Rapid diversification, incomplete isolation, and the "speciation clock" in North American salamanders (Genus Plethodon): testing the hybrid swarm hypothesis of rapid radiation. |
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Novel relationships among ten fish model species revealed based on a phylogenomic analysis using ESTs. |
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Mitochondrial and nuclear phylogenies of Cervidae (Mammalia, Ruminantia): Systematics, morphology, and biogeography. |
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Linking patterns and processes of species diversification in the cone flies Strobilomyia (Diptera: Anthomyiidae). |
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Mol Ecol |
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Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Southern hemisphere springtails: could any have survived glaciation of Antarctica? |
Mol Biol Evol |
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The evolutionary history of Melianthus (Melianthaceae) |
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Recent and simultaneous origins of eusociality in halictid bees. |
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[Evolutionary relationships among narrow-headed rats (genus Stenocephalemys, Muridae, Rodentia) inferred from complete cytochrome b gene sequences]. |
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Reconciling extreme branch length differences: decoupling time and rate through the evolutionary history of filmy ferns. |
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A chloroplast genealogy of hordeum (poaceae): Long-term persisting haplotypes, incomplete lineage sorting, regional extinction, and the consequences for phylogenetic inference. |
Mol Biol Evol |
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Nuclear and mitochondrial sequence data reveal the major lineages of starlings, mynas and related taxa. |
Mol Phylogenet Evol |
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Molecular phylogeny of the Cricetinae subfamily based on the mitochondrial cytochrome b and 12S rRNA genes and the nuclear vWF gene. |
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Evolution of Afrotropical freshwater crab lineages obscured by morphological convergence. |
Mol Phylogenet Evol |
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The platypus is in its place: nuclear genes and indels confirm the sister group relation of monotremes and Therians. |
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Housekeeping genes for phylogenetic analysis of eutherian relationships. |
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The mahogany family "out-of-Africa": divergence time estimation, global biogeographic patterns inferred from plastid rbcL DNA sequences, extant, and fossil distribution of diversity. |
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Rapid lineage accumulation in a non-adaptive radiation: phylogenetic analysis of diversification rates in eastern North American woodland salamanders (Plethodontidae: Plethodon). |
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Intercontinental biogeography of subfamily Orontioideae (Symplocarpus, Lysichiton, and Orontium) of Araceae in Eastern Asia and North America. |
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Phylogeny, historical biogeography, and patterns of diversification for Pinus (Pinaceae): phylogenetic tests of fossil-based hypotheses. |
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Uplift of the Tibetan plateau: evidence from divergence times of glyptosternoid catfishes. |
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Early penguin fossils, plus mitochondrial genomes, calibrate avian evolution. |
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Mid-Pleistocene divergence of Cuban and North American ivory-billed woodpeckers. |
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Systematics and historical biogeography of Greater Antillean Cichlidae. |
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Molecular evidence for the age, origin, and evolutionary history of the American desert plant genus Tiquilia (Boraginaceae). |
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That awkward age for butterflies: insights from the age of the butterfly subfamily Nymphalinae (Lepidoptera: Nymphalidae). |
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Testing the molecular clock: molecular and paleontological estimates of divergence times in the Echinoidea (Echinodermata). |
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Evolution of rattlesnakes (Viperidae; Crotalus) in the warm deserts of western North America shaped by Neogene vicariance and Quaternary climate change. |
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A molecular time-scale for eukaryote evolution recalibrated with the continuous microfossil record. |
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Complete mitochondrial genome and phylogeny of Pleistocene mammoth Mammuthus primigenius. |
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Molecular phylogenetics and evolutionary diversification of labyrinth fishes (Perciformes : Anabantoidei) |
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Molecular phylogeny and historical biogeography of the land snail genus Solatopupa (Pulmonata) in the peri-Tyrrhenian area. |
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A molecular timescale for galliform birds accounting for uncertainty in time estimates and heterogeneity of rates of DNA substitutions across lineages and sites. |
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The origin of the East Asian Erithacus robin, Erithacus komadori, inferred from cytochrome b sequence data. |
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Analysis of the complete mitochondrial DNA from Anopheles funestus: an improved dipteran mitochondrial genome annotation and a temporal dimension of mosquito evolution. |
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Phylogenetic relationships and historical biogeography of neotropical parrots (Psittaciformes: Psittacidae: Arini) inferred from mitochondrial and nuclear DNA sequences. |
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Phylogeny, evolution, and biogeography of Asiatic Salamanders (Hynobiidae). |
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Molecular phylogenetics and biogeography of Lepus in Eastern Asia based on mitochondrial DNA sequences. |
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Molecular dating of caprines using ancient DNA sequences of Myotragus balearicus, an extinct endemic Balearic mammal. |
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Refugia, dispersal and divergence in a forest archipelago: a study of Streptocarpus in eastern South Africa. |
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Genetic divergence does not predict change in ornament expression among populations of stalk-eyed flies. |
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Origin, diversification, and historical biogeography of the genus Trachurus (Perciformes: Carangidae). |
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The phylogenetic history and biogeography of the frankincense and myrrh family (Burseraceae) based on nuclear and chloroplast sequence data. |
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Insight into the phylogeny of African Clariidae (Teleostei, Siluriformes): implications for their body shape evolution, biogeography, and taxonomy. |
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60 million years of co-divergence in the fig-wasp symbiosis. |
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Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary. |
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A phylogenetic framework for the terns (Sternini) inferred from mtDNA sequences: implications for taxonomy and plumage evolution. |
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| Steiner |
New DNA data from a transthyretin nuclear intron suggest an Oligocene to Miocene diversification of living South America opossums (Marsupialia: Didelphidae). |
Mol Phylogenet Evol |
2005 |
15804409
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3 Trees
|
| Veyrunes |
Molecular phylogeny of the African pygmy mice, subgenus Nannomys (Rodentia, Murinae, Mus): implications for chromosomal evolution. |
Mol Phylogenet Evol |
2005 |
15955515
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2 Trees
|
| Chevret |
Systematics and evolution of the subfamily Gerbillinae (Mammalia, Rodentia, Muridae). |
Mol Phylogenet Evol |
2005 |
15878135
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1 Tree
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| Tosi |
X-chromosomal window into the evolutionary history of the guenons (Primates: Cercopithecini). |
Mol Phylogenet Evol |
2005 |
15904856
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1 Tree
|
| Roelants |
Archaeobatrachian paraphyly and pangaean diversification of crown-group frogs. |
Syst Biol |
2005 |
15805014
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1 Tree
|
| Blair |
Evolutionary sequence analysis of complete eukaryote genomes. |
BMC Bioinformatics |
2005 |
15762985
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4 Trees
|
| Leebens-Mack |
Identifying the basal angiosperm node in chloroplast genome phylogenies: sampling ones way out of the Felsenstein zone. |
Mol Biol Evol |
2005 |
15944438
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1 Tree
|
| Vidal |
The phylogeny of squamate reptiles (lizards, snakes, and amphisbaenians) inferred from nine nuclear protein-coding genes. |
C R Biol |
2005 |
16286089
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1 Tree
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Divergence times and historical biogeography of Nymphaeales |
SYSTEMATIC BOTANY |
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Mitogenomic perspectives on the origin and phylogeny of living amphibians. |
Syst Biol |
2005 |
16012106
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6 Trees
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Replicate patterns of species richness, historical biogeography, and phylogeny in Holarctic treefrogs. |
Evolution Int J Org Evolution |
2005 |
16396184
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1 Tree
|
| Eick |
A nuclear DNA phylogenetic perspective on the evolution of echolocation and historical biogeography of extant bats (chiroptera). |
Mol Biol Evol |
2005 |
15930153
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1 Tree
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| Poulakakis |
Phylogenetic relationships and biogeography of Podarcis species from the Balkan Peninsula, by bayesian and maximum likelihood analyses of mitochondrial DNA sequences. |
Mol Phylogenet Evol |
2005 |
16039146
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1 Tree
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| Thorpe |
Molecular clocks and geological dates: cytochrome b of Anolis extremus substantially contradicts dating of Barbados emergence. |
Mol Ecol |
2005 |
15910329
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1 Tree
|
| Near |
Fossil calibrations and molecular divergence time estimates in centrarchid fishes (Teleostei: Centrarchidae). |
Evolution |
2005 |
16329246
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1 Tree
|
| Magallón |
Angiosperm divergence times: the effect of genes, codon positions, and time constraints. |
Evolution |
2005 |
16329238
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1 Tree
|
| Domingues |
Historical colonization and demography of the Mediterranean damselfish, Chromis chromis. |
Mol Ecol |
2005 |
16262858
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4 Trees
|
| Kergoat |
Parallels in the evolution of the two largest New and Old World seed-beetle genera (Coleoptera, Bruchidae). |
Mol Ecol |
2005 |
16262855
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1 Tree
|
| Keith |
Ubiquity of Sicyopterus lagocephalus (Teleostei: Gobioidei) and phylogeography of the genus Sicyopterus in the Indo-Pacific area inferred from mitochondrial cytochrome b gene. |
Mol Phylogenet Evol |
2005 |
16214374
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1 Tree
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| Bonacum |
Phylogeny and age of diversification of the planitibia species group of the Hawaiian Drosophila. |
Mol Phylogenet Evol |
2005 |
16182150
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1 Tree
|
| Takamatsu |
Caespitotheca gen. nov., an ancestral genus in the Erysiphales. |
Mycol Res |
2005 |
16175792
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1 Tree
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| Clarkson |
Long-term genome diploidization in allopolyploid Nicotiana section Repandae (Solanaceae). |
New Phytol |
2005 |
16159337
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1 Tree
|
| Opazo |
A molecular timescale for caviomorph rodents (Mammalia, Hystricognathi). |
Mol Phylogenet Evol |
2005 |
16085429
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8 Trees
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| Raaum |
Catarrhine primate divergence dates estimated from complete mitochondrial genomes: concordance with fossil and nuclear DNA evidence. |
J Hum Evol |
2005 |
15737392
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3 Trees
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| Grau |
Molecular phylogenetics and biogeography of Neotropical piping guans (Aves: Galliformes): Pipile Bonaparte, 1856 is synonym of Aburria Reichenbach, 1853. |
Mol Phylogenet Evol |
2005 |
15878132
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1 Tree
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| Near |
Dispersal, vicariance, and timing of diversification in Nothonotus darters. |
Mol Ecol |
2005 |
16156817
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1 Tree
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Inference of a radiation in Mastus (Gastropoda, Pulmonata, Enidae) on the island of Crete. |
Evolution |
2005 |
16136799
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1 Tree
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Origin of the Eumetazoa: testing ecological predictions of molecular clocks against the Proterozoic fossil record. |
Proc Natl Acad Sci U S A |
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15983372
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1 Tree
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| Near |
Assessing concordance of fossil calibration points in molecular clock studies: an example using turtles. |
Am Nat |
2005 |
15729646
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1 Tree
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Molecular phylogeography of Dolichopoda cave crickets (Orthoptera, Rhaphidophoridae): a scenario suggested by mitochondrial DNA. |
Mol Phylogenet Evol |
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1 Tree
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Phylogenetic relationships and evolutionary history of the reef fish family Labridae. |
Mol Phylogenet Evol |
2005 |
15955516
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1 Tree
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Interspecific phylogeography of the Stator limbatus species complex: the geographic context of speciation and specialization. |
Mol Phylogenet Evol |
2005 |
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1 Tree
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Phylogeny of endosymbiont bacteria harbored by the woodroach Cryptocercus spp. (Cryptocercidae: Blattaria): molecular clock evidence for a late Cretaceous--early Tertiary split of Asian and American lineages. |
Mol Phylogenet Evol |
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15890537
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1 Tree
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Mitochondrial phylogenetics and evolution of mysticete whales. |
Syst Biol |
2005 |
15805012
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1 Tree
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Mitochondrial phylogeny reveals differential modes of chromosomal evolution in the genus Tatera (Rodentia: Gerbillinae) in Africa. |
Mol Phylogenet Evol |
2005 |
15878125
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1 Tree
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Very close relationship of the chloroplast genomes among Saccharum species. |
Theor Appl Genet |
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1 Tree
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Time dependency of molecular rate estimates and systematic overestimation of recent divergence times. |
Molecular biology and evolution |
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Initial diversification of living amphibians predated the breakup of Pangaea. |
Am Nat |
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Macroevolutionary interplay between planktic larvae and benthic predators |
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Astragalus (Fabaceae): A molecular phylogenetic perspective |
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Molecular phylogeny of the Cheilodactylidae and Latridae (Perciformes: Cirrhitoidea) with notes on taxonomy and biogeography. |
Mol Phylogenet Evol |
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15022763
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1 Tree
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| Douzery |
Rabbits, if anything, are likely Glires. |
Mol Phylogenet Evol |
2004 |
15522813
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3 Trees
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Genets (Carnivora\, Viverridae) in Africa: an evolutionary synthesis based on cytochrome b sequences and morphological characters |
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Four new avian mitochondrial genomes help get to basic evolutionary questions in the late cretaceous. |
Mol Biol Evol |
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Molecular evidence for naturalness of genera in the tribe Antirrhineae (Scrophulariaceae) and three independent evolutionary lineages from the New World and the Old |
PLANT SYSTEMATICS AND EVOLUTION |
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Jurassic frogs and the evolution of amphibian endemism in the Western Ghats |
CURRENT SCIENCE |
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Mitogenomic analyses provide new insights into cetacean origin and evolution. |
Gene |
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3 Trees
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A chloroplast phylogeny of Arisaema (Araceae) illustrates tertiary floristic links between Asia\, North America\, and East Africa |
AMERICAN JOURNAL OF BOTANY |
2004 |
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1 Tree
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Genetic variation in a cline in a living intertidal snail arose in the Neogastropoda over 100 million years ago. |
J Mol Evol |
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Mitochondrial differentiation, introgression and phylogeny of species in the Tegenaria atrica group (Araneae : Agelenidae) |
BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY |
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Phylogeny of African Myotis bats (Chiroptera\, Vespertilionidae) inferred from cytochrome b sequences |
ACTA CHIROPTEROLOGICA |
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Molecular phylogeny and biogeography of the genus Pseudomma (Peracarida : Mysida) |
JOURNAL OF CRUSTACEAN BIOLOGY |
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Estimating absolute rates of synonymous and nonsynonymous nucleotide substitution in order to characterize natural selection and date species divergences. |
Mol Biol Evol |
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1 Tree
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| Luo |
Molecular phylogeny and biogeography of Oriental voles: genus Eothenomys (Muridae, Mammalia). |
Mol Phylogenet Evol |
2004 |
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1 Tree
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A mitochondrial DNA phylogeny of African clawed frogs: phylogeography and implications for polyploid evolution. |
Mol Phylogenet Evol |
2004 |
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1 Tree
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Molecular systematics of racers\, whipsnakes and relatives (Reptilia : Colubridae) using mitochondrial and nuclear markers |
JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH |
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The colonization of land by animals: molecular phylogeny and divergence times among arthropods. |
BMC Biol |
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From Europe to Africa and vice versa: evidence for multiple intercontinental dispersal in ribbed salamanders (Genus Pleurodeles) |
JOURNAL OF BIOGEOGRAPHY |
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Phylogeny and historical biogeography of limpets of the order Patellogastropoda based on mitochondrial DNA sequences |
JOURNAL OF MOLLUSCAN STUDIES |
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Estimating divergence times of notothenioid fishes using a fossil-calibrated molecular clock |
Antarctic Sci. |
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Molecular data suggest that melanistic ectotherms at the south-western tip of Africa are the products of Miocene climatic events: evidence from cordylid lizards |
JOURNAL OF ZOOLOGY |
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Phylogeny and evolution of ferns (monilophytes) with a focus on the early leptosporangiate divergences |
American Journal of Botany |
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1 Tree
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Phylogeny and diversification of the largest avian radiation. |
Proc Natl Acad Sci U S A |
2004 |
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1 Tree
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Endemic ranid (Amphibia: Anura) genera in southern mountain ranges of the Indian subcontinent represent ancient frog lineages: evidence from molecular data. |
Mol Phylogenet Evol |
2004 |
15062806
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10 Trees
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Evolution and biogeography of marine angelfishes (Pisces: Pomacanthidae). |
Mol Phylogenet Evol |
2004 |
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Robust support for tardigrade clades and their ages from three protein-coding nuclear genes |
INVERTEBRATE BIOLOGY |
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MtDNA phylogeny and biogeography of Copelatinae, a highly diverse group of tropical diving beetles (Dytiscidae). |
Mol Phylogenet Evol |
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15288062
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1 Tree
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Molecular phylogeny and morphological change in the Psittacula parakeets. |
Mol Phylogenet Evol |
2004 |
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1 Tree
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Temporal diversification of Mesoamerican cichlid fishes across a major biogeographic boundary. |
Mol Phylogenet Evol |
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15062808
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1 Tree
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| Tamura |
Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks. |
Mol Biol Evol |
2004 |
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1 Tree
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| Steppan |
Phylogeny and divergence-date estimates of rapid radiations in muroid rodents based on multiple nuclear genes. |
Syst Biol |
2004 |
15371245
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3 Trees
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| Hedges |
A molecular timescale of eukaryote evolution and the rise of complex multicellular life. |
BMC Evol Biol |
2004 |
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1 Tree
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| Steiper |
Genomic data support the hominoid slowdown and an Early Oligocene estimate for the hominoid-cercopithecoid divergence. |
Proc Natl Acad Sci U S A |
2004 |
15572456
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2 Trees
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Molecular phylogenetic relationships of two extinct potoroid marsupials, Potorous platyops and Caloprymnus campestris (Potoroinae: Marsupialia). |
Mol Phylogenet Evol |
2004 |
15062789
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3 Trees
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Marsupial relationships and a timeline for marsupial radiation in South Gondwana. |
Gene |
2004 |
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DNA Data Support a Rapid Radiation of Pocket Gopher Genera (Rodentia: Geomyidae) |
JOURNAL OF MAMMALIAN EVOLUTION |
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Insight into the origin of endemic Mediterranean ichthyofauna: phylogeography of Chondrostoma genus (Teleostei, Cyprinidae). |
J Hered |
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The timing of eukaryotic evolution: does a relaxed molecular clock reconcile proteins and fossils? |
Proc Natl Acad Sci U S A |
2004 |
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A phylogenetic review of the African leaf chameleons: genus Rhampholeon (Chamaeleonidae): the role of vicariance and climate change in speciation. |
Proc Biol Sci |
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Phylogenetic analysis of Hordeum (Poaceae) as inferred by nuclear rDNA ITS sequences. |
Mol Phylogenet Evol |
2004 |
15336664
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1 Tree
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| Kotlík |
Circum Black Sea phylogeography of Barbus freshwater fishes: divergence in the Pontic glacial refugium. |
Mol Ecol |
2004 |
14653791
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1 Tree
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Molecular phylogeny and biogeography of the Korean woodroaches Cryptocercus spp. |
Mol Phylogenet Evol |
2004 |
14715235
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1 Tree
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| Faulkes |
Phylogeographical patterns of genetic divergence and speciation in African mole-rats (Family: Bathyergidae). |
Mol Ecol |
2004 |
14871365
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1 Tree
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| Yoon |
A molecular timeline for the origin of photosynthetic eukaryotes. |
Mol Biol Evol |
2004 |
14963099
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1 Tree
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| Plana |
Pleistocene and pre-Pleistocene Begonia speciation in Africa. |
Mol Phylogenet Evol |
2004 |
15062787
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1 Tree
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| Megens |
Tempo of speciation in a butterfly genus from the Southeast Asian tropics, inferred from mitochondrial and nuclear DNA sequence data. |
Mol Phylogenet Evol |
2004 |
15120408
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1 Tree
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| Liu |
Molecular phylogeny and taxonomy of wood mice (genus Apodemus Kaup, 1829) based on complete mtDNA cytochrome b sequences, with emphasis on Chinese species. |
Mol Phylogenet Evol |
2004 |
15324834
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1 Tree
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| Mabuchi |
Molecular phylogeny of the antitropical genus Pseudolabrus (Perciformes: Labridae): evidence for a Southern Hemisphere origin. |
Mol Phylogenet Evol |
2004 |
15186821
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1 Tree
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| Ponniah |
The evolution of Queensland spiny mountain crayfish of the genus Euastacus. I. Testing vicariance and dispersal with interspecific mitochondrial DNA. |
Evolution |
2004 |
15212388
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2 Trees
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| Fromhage |
Testing alternative vicariance scenarios in Western Mediterranean discoglossid frogs. |
Mol Phylogenet Evol |
2004 |
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3 Trees
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The age of major monocot groups inferred from 800 plus rbcL sequences |
Bot. J. Linn. Soc |
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Assessing the passerine "Tapestry": phylogenetic relationships of the Muscicapoidea inferred from nuclear DNA sequences. |
Mol Phylogenet Evol |
2004 |
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3 Trees
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| Mansion |
Generic delimitation and phylogenetic relationships within the subtribe Chironiinae (Chironieae: Gentianaceae), with special reference to Centaurium: evidence from nrDNA and cpDNA sequences. |
Mol Phylogenet Evol |
2004 |
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1 Tree
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Phylogeny and biogeography of Rhododendron subsection Pontica, a group with a tertiary relict distribution. |
Mol Phylogenet Evol |
2004 |
15336673
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Ice sheets promote speciation in boreal birds. |
Proc Biol Sci |
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15347509
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8 Trees
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| Rüber |
Evolutionary and biogeographic patterns of the Badidae (Teleostei: Perciformes) inferred from mitochondrial and nuclear DNA sequence data. |
Mol Phylogenet Evol |
2004 |
15354300
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1 Tree
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Calibration of molecular clocks and the biogeographic history of Crypteroniaceae. |
Evolution |
2004 |
15446441
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1 Tree
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Influence of Tertiary paleoenvironmental changes on the diversification of South American mammals: a relaxed molecular clock study within xenarthrans. |
BMC Evol Biol |
2004 |
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1 Tree
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Molecular phylogeny and biogeography of woolly flying squirrel (Rodentia: Sciuridae), inferred from mitochondrial cytochrome b gene sequences. |
Mol Phylogenet Evol |
2004 |
15522800
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1 Tree
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| Yi |
Phylogenetic and biogeographic diversification of Rhus (Anacardiaceae) in the Northern Hemisphere. |
Mol Phylogenet Evol |
2004 |
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1 Tree
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Evolution and phylogeny of old world deer. |
Mol Phylogenet Evol |
2004 |
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1 Tree
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| Williams |
Speciation and diversity on tropical rocky shores: a global phylogeny of snails of the genus Echinolittorina. |
Evolution |
2004 |
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1 Tree
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| Hugall |
Molecular claims of Gondwanan age for Australian agamid lizards are untenable. |
Mol Biol Evol |
2004 |
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1 Tree
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| Near |
Rapid allopatric speciation in logperch darters (Percidae: Percina). |
Evolution |
2004 |
15696757
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1 Tree
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| Ribera |
Phylogeny and historical biogeography of Agabinae diving beetles (Coleoptera) inferred from mitochondrial DNA sequences. |
Mol Phylogenet Evol |
2004 |
15012938
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1 Tree
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| Richardson |
Historical biogeography of two cosmopolitan families of flowering plants: Annonaceae and Rhamnaceae. |
Philos Trans R Soc Lond B Biol Sci |
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1 Tree
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| Degnan |
Host-symbiont stability and fast evolutionary rates in an ant-bacterium association: cospeciation of camponotus species and their endosymbionts, candidatus blochmannia. |
Syst Biol |
2004 |
14965905
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1 Tree
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| Pérez-Losada |
Molecular systematics and biogeography of the southern South american freshwater "crabs" Aegla (decapoda: Anomura: Aeglidae) using multiple heuristic tree search approaches. |
Syst Biol |
2004 |
15545254
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1 Tree
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| Zakharov |
Molecular phylogeny, historical biogeography, and divergence time estimates for swallowtail butterflies of the genus Papilio (Lepidoptera: Papilionidae). |
Syst Biol |
2004 |
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Evolution and biogeography of the austral genus Phyllocladus (Podocarpaceae) |
JOURNAL OF BIOGEOGRAPHY |
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1 Tree
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Phylogeny and circumscription of the near-endemic Brazilian tribe Microlicieae (Melastomataceae) |
American Journal of Botany |
2004 |
21653466
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1 Tree
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The phylogeny of the Cocoeae(Arecaceae) with emphasis on Cocos nucifera |
ANNALS OF THE MISSOURI BOTANICAL GARDEN |
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Ancient vicariance or recent long-distance dispersal? Inferences about phylogeny and South American-African disjunctions in rapateaceae and bromeliaceae based on ndhF sequence data |
INTERNATIONAL JOURNAL OF PLANT SCIENCES |
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Phylogenetic relationships within the new world endemic Zeltnera (Gentianaceae-Chironiinae) inferred from molecular and karyological data |
American Journal of Botany |
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1 Tree
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| Danforth |
Single-copy nuclear genes recover cretaceous-age divergences in bees. |
Syst Biol |
2004 |
15205055
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Phylogeny of basal hexapod lineages and estimates of divergence times |
ANNALS OF THE ENTOMOLOGICAL SOCIETY OF AMERICA |
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Molecular systematics and time-scale for the evolution of Timarcha, a leaf-beetle genus with a disjunct Holarctic distribution. |
Mol Phylogenet Evol |
2004 |
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1 Tree
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Bayesian analysis of combined chloroplast loci+ using multiple calibrations+ supports the recent arrival of melastomataceae in Africa and Madagascar |
American Journal of Botany |
2004 |
21652376
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1 Tree
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| Hulva |
Molecular architecture of Pipistrellus pipistrellus/Pipistrellus pygmaeus complex (Chiroptera: Vespertilionidae): further cryptic species and Mediterranean origin of the divergence. |
Mol Phylogenet Evol |
2004 |
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Genetic variation within endemic Podarcis lizards from the Balearic Islands inferred from partial Cytochrome b sequences |
Amphibia-Reptilia |
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Paleoclimatic history and vicariant speciation in the "sand goby" group (Gobiidae, Teleostei). |
Mol Phylogenet Evol |
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High-latitude tertiary migrations of an exclusively tropical clade: Evidence from Malpighiaceae |
INTERNATIONAL JOURNAL OF PLANT SCIENCES |
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Patterns of lineage diversification in the genus Naso (Acanthuridae). |
Mol Phylogenet Evol |
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| Clement |
Phylogenetic position and biogeography of Hillebrandia sandwicensis (Begoniaceae): a rare Hawaiian relict |
American Journal of Botany |
2004 |
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1 Tree
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Primate phylogeny, evolutionary rate variations, and divergence times: a contribution from the nuclear gene IRBP. |
Am J Phys Anthropol |
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7 Trees
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Clade-limited colonization in brood parasitic finches (Vidua spp.). |
Syst Biol |
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Vicariant speciation of curassows (Aves\, Cracidae): A hypothesis based on mitochondrial DNA phylogeny |
AUK |
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Molecular phylogeny and divergence time of the Antarctic sea urchin (Sterechinus neumayeri) in relation to the South American sea urchins |
Antarctic Science |
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A molecular supermatrix of the rabbits and hares (Leporidae) allows for the identification of five intercontinental exchanges during the Miocene. |
Syst Biol |
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Molecular phylogenetic evidence for ancient divergence of lizard taxa on either side of Wallace's Line |
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Mitochondrial DNA phylogeography and population history of Meladema diving beetles on the Atlantic Islands and in the Mediterranean basin (Coleoptera, Dytiscidae). |
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Immunoglobulin genetics of Ornithorhynchus anatinus (platypus) and Tachyglossus aculeatus (short-beaked echidna). |
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DC-ART: decreased inflammatory synovitis. |
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